Bacteroides heparinolyticus: C3V43_02400
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Entry
C3V43_02400 CDS
T05405
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bhf
Bacteroides heparinolyticus
Pathway
bhf03420
Nucleotide excision repair
bhf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3V43_02400
03430 Mismatch repair
C3V43_02400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhf03400
]
C3V43_02400
Enzymes [BR:
bhf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3V43_02400
DNA repair and recombination proteins [BR:
bhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3V43_02400
MMR (mismatch excision repair)
Other MMR factors
C3V43_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
ApbA
Motif
Other DBs
NCBI-ProteinID:
AVM56745
LinkDB
All DBs
Position
596201..598507
Genome browser
AA seq
768 aa
AA seq
DB search
MPDYIQELNEGQRAAVLYNDGPSLVIAGAGSGKTRVLTYKIAYLLENGYQPWDILALTFT
NKAAREMKERIACQVGTDRARYLWMGTFHSIFLRILHVEAVHLGFTSQFTIYDTADGKSL
IRSIIKEMGLDEKIYKPGLVQARISNAKNHLVSPAGYANSKEAYEADRAAKVPALRDIYQ
RYWARCKQADAMDFDDLLFYTFLLFQDHPEVLARYQEQFRYILVDEYQDTNFAQHSIVLQ
LGKNHQHVCVVGDDAQSIYSFRGADIDNILFFTKIYPSAKVFKLEQNYRSTQTIVCAANS
LIEKNQRQIRKEVFSEKEKGEALGVYQAYSDVEEGDIVVNKIAELRREKQYAYSDFAILY
RTNAQSRIFEEAMRKRGMPYRIYGGLSFYQRKEIKDVISYFRLIINPNDEEAFKRIINYP
ARGIGDTTVGKIIAAATTHNVSLWTILCEPLTYGLTFTKGTTGKLQGFHELISGFMACAA
DKNAYEIGSDIIRRSGIINDVCQDNSPENLSRRENIEELVNGMSDFCARRQEEGNPDIFL
ADFLSEVSLLTDQDSDKNDDEKITLMTVHSAKGLEFKNVFVVGMEENLFPSAMIGESVRA
LEEERRLFYVAITRAEEHCFLSYAKTRFRFGKMEFGSPSRFLKDIDVRFLHLPNTNLSFR
MGEDVHNDFSYKKREEGMMRPKQQVISPAVPRNLKRVMPASDSAGTTSQSGVSISGVMEG
QLIEHERFGIGEVLKMEGEGDNAKATIRFKNAGDKQLLLHFARFKVIG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattatatacaggaactgaatgaaggacagcgcgcagcggtgctttacaatgat
ggtccgtcattggtgatagccggtgccggttctggaaagacgcgtgtactgacatataaa
atagcctatctgctggagaatggttaccagccttgggatattcttgcattgacctttacc
aataaagcggcacgtgagatgaaagagcgcatagcgtgtcaagtgggcacagaccgcgcg
cgttatttatggatgggaacctttcactccatatttttgcgtatcttgcatgttgaggct
gttcatcttggttttacttcgcaatttaccatatatgacacggcagatggtaagagtttg
atacgttctatcataaaagagatgggattggatgaaaagatatacaaacccggattggtt
caagcacgtatatcaaatgccaagaatcatttggtttcccctgcggggtatgcaaacagt
aaagaagcctatgaggcagatcgtgctgcaaaagtacctgcccttcgcgacatatatcaa
agatactgggcacgttgcaagcaggcagatgccatggactttgacgatttacttttctac
acctttttactgtttcaagatcatccggaagtacttgcccgttatcaggaacaattccgt
tatattttggtagatgaatatcaagacactaatttcgcacaacatagcattgtactacag
ttgggcaagaaccatcagcatgtatgtgtagtaggcgatgatgcgcagagtatttactct
tttcgtggggccgatatcgacaatatcttgtttttcaccaagatatatcccagtgccaaa
gtatttaaattagaacagaattatcgttctactcaaaccattgtttgtgcggccaatagc
ttgatagagaagaatcaacggcagatacgcaaagaggtcttttctgaaaaagagaagggg
gaggcacttggcgtttatcaagcctacagtgatgtggaagaaggagatattgtggtaaat
aaaattgctgaattgcgtcgagaaaaacagtatgcttattctgattttgcgatactttac
cgtactaatgcacagagtcgcatttttgaagaagctatgcgtaagcgaggaatgccatat
cgtatatatggtggcttgtcgttttatcagcgtaaagaaatcaaggatgtgatttcctat
ttccgattgatcataaaccctaatgatgaggaggcattcaagcgtattatcaattatccg
gcacgtggcatcggtgatactacagtaggtaaaatcattgcagctgctacgacgcacaat
gtcagcttatggacgatactttgcgaaccattgacctatggactgactttcacgaaaggt
acgacagggaagttgcaaggctttcacgaattgatatctggcttcatggcatgtgcggct
gataagaatgcttacgagattggttccgatattattcgccggtcgggtatcatcaatgat
gtctgtcaggataactcgccggaaaatttgagccgtagggagaacatagaggaattggtg
aatggcatgagtgatttttgtgctcggcggcaagaggaaggaaatccggatatctttttg
gctgatttcttgtcggaagtttcattattgacagatcaggattcggataagaacgatgat
gagaagataactttaatgacggttcattctgccaagggactggagttcaagaatgttttt
gtggtgggaatggaagagaatcttttccctagtgcaatgattggagaatctgtccgcgca
ttggaagaagagcgcagactgttctatgtggctattacacgtgcggaggaacattgtttt
ttatcttatgcaaagactcgtttcaggtttggtaaaatggaatttggaagtcccagtcgc
ttcctgaaagatatagacgtacgatttttgcatttgcctaatacaaatctctcctttaga
atgggggaagatgtgcataacgatttctcttataaaaagagagaggaagggatgatgcgt
ccgaagcaacaggttatatctccggccgttcctcgtaatttgaaacgagtgatgcctgcc
tctgattcggcaggaacaacgtctcaatccggtgtttctatcagtggagttatggaagga
caactgattgaacatgaacgcttcggcataggagaagtgttgaaaatggaaggtgaggga
gataatgctaaagccactattcgctttaaaaatgcgggagataaacaacttttgttgcac
tttgcgcgtttcaaggtgataggatag
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integrated database retrieval system
