Prevotella heparinolytica: C3V43_03865
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Entry
C3V43_03865 CDS
T05405
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bhf
Prevotella heparinolytica
Pathway
bhf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3V43_03865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhf03400
]
C3V43_03865
DNA repair and recombination proteins [BR:
bhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3V43_03865
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C3V43_03865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
EAD4
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AVM56983
LinkDB
All DBs
Position
complement(929397..931457)
Genome browser
AA seq
686 aa
AA seq
DB search
MSKFELTSAYRPTGDQPEAIAQLTEGIREGLPAQTLLGVTGSGKTFTIANVIANINKPTL
ILSHNKTLAAQLYSEFKSFFPNNAVEYYVSYYDYYQPEAYLPSSDTYIEKDLAINDEIDK
LRLAATSALLSGRKDVVVVSSVSCIYGMGNPADFYNNVIEVQQGRNFSRNVFLRRLVDSL
YVRNDIDLNRGNFRVKGDTVDIYLAYADNLLRIVFWGDEIDSIEEVDPISGVTVGKFDAY
KIYPANLFMTTKEATLRAIHEIEDDLHKQVQWFESEGRTFEAKRLQERVTYDMEMIRELG
HCSGIENYSRYFDGRAAGTRPYCLLDFFPEDFLIVIDESHVSVPQIRAMYGGDRARKENL
VEYGFRLPAAKDNRPLKFDEFEEMAKQVIYVSATPADYELMKSEGIVVEQVIRPTGLLDP
IIEVRPSHNQIDDLMEEIQLRIEKNERTLVTTLTKRMAEELTEYLLNNQVRCNYIHSDVD
TLERVKIMSDLREGLYDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGR
AARNVNGMVIMYADKITESMQMTIDETNRRREKQLKYNEENGITPQQIKKAKNLNVFATG
EPSAPPASENENRTGSTPRPYVEQEPTSSVAADPIVRYMNRAQLEKSIERTRKLMQEAAK
KLDFIEAAQYRDEVLKMEELLKEKAK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattcgagctgacatctgcctatcgtcccacgggagaccaacctgaggccatc
gcacaactgaccgaaggcatacgcgaggggcttcccgcacaaactcttctcggtgtcacc
ggttcgggaaagacattcaccatagccaatgttattgccaacatcaataaaccgaccttg
atattgagccacaataaaacgttggccgcacaactatacagtgagttcaagagcttcttc
cccaacaatgcggtggagtattatgtatcgtattacgattattaccaaccggaagcctac
ctgccttcttcggacacctatatagagaaggaccttgccatcaacgacgagatagacaaa
ctgcggcttgccgccacctctgccctgctttccggcaggaaagacgtggtggtggtatcg
tctgtttcgtgcatctacggtatgggaaatcctgccgacttctacaacaatgtcattgaa
gtgcagcaaggcagaaatttcagccggaacgtattcttgcgacgcttggtggatagtctc
tatgtgcgcaacgacatagacctgaaccgtggcaacttccgtgtgaaaggagataccgtg
gacatctatctggcatacgccgacaatctgttgcgcattgttttttggggcgatgagata
gacagcatcgaagaggtagaccccatcagcggtgtgacagtcggtaaattcgatgcctat
aagatttatcccgccaacctcttcatgacaaccaaagaagctactttgcgcgccatccac
gagatagaggacgacttgcacaaacaggtgcaatggtttgaaagtgaagggcgtaccttt
gaagccaaacgcttgcaggaacgggtgacttatgatatggagatgatacgggagctggga
cattgttcgggcatagagaattattcgcgctacttcgacgggcgggccgccggtactcgc
ccctactgcctgctggacttctttcccgaagatttcctgatagttattgacgaaagccac
gtcagcgttccgcagatacgtgccatgtatggaggcgaccgtgcccgcaaggagaatctg
gtggaatacggcttccggctgcctgctgctaaagataaccgtccgttgaagttcgacgag
ttcgaagagatggccaaacaagtgatttacgtcagcgccacacctgccgattatgagctg
atgaagtcggaaggcattgtggtagagcaggtcattcgtcccacaggattgctcgaccct
atcattgaggtgcgtcccagccacaaccagatagacgacttgatggaagagatacaacta
cgcatcgagaagaacgaacgcactctcgtaaccaccctcaccaaacgaatggcggaggag
ctgaccgaatatttgctgaacaatcaggtgagatgtaactatatacacagcgatgtagat
acgctggaacgagtgaaaatcatgagcgaccttcgcgaaggattgtatgacgtactgatt
ggcgtgaatctgttgcgcgaaggacttgatttgccggaggtttctcttgtggccatcctt
gatgccgacaaagagggctttctccgctcccaccgttcgctgacgcagactgccggccgt
gctgcccgcaacgtgaacggaatggtcatcatgtatgccgacaaaataacggaaagcatg
caaatgactattgatgaaaccaaccgacgccgcgagaaacagttgaaatacaacgaagag
aacggtatcacaccccagcagataaaaaaagcgaagaatctcaatgtttttgccaccggc
gaaccttctgccccgcctgcttccgagaatgaaaaccggaccggcagtactcctcgtccc
tatgtggaacaagaaccaacgtcttctgttgccgccgacccgattgtccggtacatgaac
cgcgcgcaactggaaaagagcatcgaacgtaccagaaaactcatgcaggaagcagccaag
aagctcgacttcatcgaagctgcccaatatcgcgacgaggtgttgaaaatggaagagttg
ctgaaagaaaaagcgaaatag
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integrated database retrieval system
