Prevotella heparinolytica: C3V43_06085
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Entry
C3V43_06085 CDS
T05405
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
bhf
Prevotella heparinolytica
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhf02000
]
C3V43_06085
Transporters [BR:
bhf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C3V43_06085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
AVM57372
LinkDB
All DBs
Position
complement(1485453..1487093)
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AA seq
546 aa
AA seq
DB search
MKRNIFYIVISSTLLLSSCSEFLDVQPEGDATINTYFTSDQQAVDAVDALYERFHQEAVY
GRELFWEQGAACDVVWGKTRGYPTLATLKYTGDESPLRTVFDRMYTIMARSNYVIKQLLT
KADSKTLSDIERRSLGEAYFTRGWAHFLIAYRYGTDKQGVPFIRYEDYDNQNDYYSIPPQ
RESVIDNYQYIISDMDKAFEYLPRFEEYDVDDRGRAHDAAAVAFKAKVYAYWATWDATQW
EKVIAMVNELEGTYGRDLADTYAQVFSSEFTDFWNKEYLWTIPGNGGSTGGGSEFPGVIL
ENKAWGKYNGWGQNKPSYDIYAELLKDGEGNDRLIRTLLEYGQEFRLFGETRKFWSTSDI
ESGFMINKYMDPFKHEDAANKGYINTNGDWPTARINFPIIRFAEMLLFRAEAYLMTNRAD
KATADLNRIRQRAKLAPLAATAIMSDLYHERRCELAFEFTDHLFDLKRWHRSGNAEIKAL
AAAELNTHPRVRHYKDRQNPDSEYTVGAYEDYKDKATYKDHMIVFPYPSQQVVNSNGKLK
QNEGYN
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaatattttttatatcgtaatctcctcgacattgcttttgagttcatgcagc
gagtttctggatgtacagccggaaggagatgctaccattaatacatattttacgagcgat
cagcaggctgttgacgctgtggatgccttgtatgagagattccatcaggaagccgtgtat
ggtcgtgaattgttttgggagcagggcgctgcttgcgacgttgtctggggaaagacccgc
ggctatcccactctcgctacattgaaatacacaggagacgaatctcctttaaggaccgtt
tttgacaggatgtacaccattatggcgcgttccaactatgttattaagcaattgcttacg
aaggcggattccaaaaccttgtccgatatcgagcgtcgtagtttgggtgaggcctatttt
actcgtggatgggcgcatttcctgatagcttaccgctatggtacagacaaacagggtgta
ccgttcattcgctatgaagattatgacaaccaaaacgactactattccattccgcctcag
cgggagtctgtcatagacaactaccaatatatcatttcggacatggataaagcctttgaa
tacttgcccagatttgaagaatatgacgttgatgacagaggacgtgcgcacgatgcggct
gcggtagcttttaaagccaaagtgtatgcctattgggcaacgtgggatgctacgcaatgg
gagaaagtcattgctatggtaaatgagctggaaggtacgtatggtcgtgatttggcggat
acgtatgcccaagtattctcttccgaattcactgatttttggaataaggaatatttgtgg
actattccgggcaatggtggctctaccggtggtggctccgagtttccgggcgtcatcctc
gagaataaggcttggggaaaatacaacggctgggggcagaataagccttcttatgatatc
tatgccgagttgttgaaagacggagaaggcaatgaccgcctgatacgtaccctcttggaa
tatggacaggaattccggttgtttggcgaaacccgtaaattctggtctacctctgatata
gaatccggtttcatgattaacaagtatatggatccgttcaaacatgaagacgcagcaaac
aaaggctacatcaatacaaacggcgactggcctacggctcgtatcaacttcccaatcatc
cgttttgcagagatgctgttgttccgtgccgaagcttacttgatgactaacagggccgac
aaagcaacagccgacttgaatcgcattcgtcagcgtgccaaattagctccgttggctgct
accgccattatgtccgacttgtatcatgaacgtcgttgcgaacttgcttttgagtttaca
gaccatttgttcgatttgaaacgctggcatcgttccggtaatgctgaaatcaaggcattg
gcagcagccgaactgaatacccatccgagagtgcgccattataaagatcgccagaatccg
gattccgaatacacggtcggtgcttatgaggattataaagacaaggctacatataaagac
catatgattgtctttccttatccgtcccaacaagtggtgaactcgaatggtaagctgaag
caaaacgaaggttacaattaa
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