Prevotella heparinolytica: C3V43_06110
Help
Entry
C3V43_06110 CDS
T05405
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bhf
Prevotella heparinolytica
Pathway
bhf03410
Base excision repair
bhf03430
Mismatch repair
bhf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C3V43_06110 (recJ)
03430 Mismatch repair
C3V43_06110 (recJ)
03440 Homologous recombination
C3V43_06110 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhf03400
]
C3V43_06110 (recJ)
DNA repair and recombination proteins [BR:
bhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C3V43_06110 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C3V43_06110 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C3V43_06110 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
AVM58946
UniProt:
A0A2R3MVK6
LinkDB
All DBs
Position
1493817..1495556
Genome browser
AA seq
579 aa
AA seq
DB search
MTHKWNYQPITPEQTEASRQLAQELGISPILGRLLVERGITTASDARKFFRPQLPDLYDP
FLMKDMDVAVERLNKAMGKKERILIYGDYDVDGTTAVALVYKFIQQFYSNIDYYIPDRYN
EGYGVSFKGVDYAAESGVGLIIVLDCGIKAVEEITYAKAKGIDFIICDHHVPDEVLPPAV
AILNAKREDNTYPYEHLSGCGVGFKFMQAFAISNGIEFHHLIPLLDLCAVSIASDIVPIM
GENRILAYHGLKQLNSNPSVGLKAIIDVCGLTDKDITVGDIVFKIGPRINASGRIQNGKE
AVDLLTEKDFSVALEKAGQINQYNETRKDLDKTMTEEANQIVAGLDGLADRRSIVLYNED
WHKGVIGIVASRLTEIYYRPAVVLTRTDDMATGSARSVSGFDVYKAIEYCRDLLENFGGH
TYAAGLSMKVENVPAFMERFEEFVSQNILPEQTCAVIDINAEIDFKDITPKFCNDLKKFN
PFGPDNTKPVFCTHNVYDYGTSKVVGRDQEHIKLELVDNKSNNVMNGIAFGQSSHVRFIK
TKRSFDICYTIEENTHKRGEIQLQIEDIRPEASSPDSIQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgactcacaaatggaattatcaacccattacacccgaacagacagaagcaagccggcag
ttggcccaagaattggggattagcccgatactcggacgattgttggtggagcggggaata
acaacggcatcggatgcccggaagtttttccgcccgcaactgcccgacctatacgacccg
ttcctgatgaaggacatggatgtggccgtggaacgtctgaacaaggcaatggggaaaaaa
gagcgtattctgatttatggagattatgacgtagacggcactacggccgtggcgctggtc
tacaagtttattcaacaattctattcgaacatcgactattacattcccgaccgctacaac
gagggatacggagtttcgttcaaaggggtggactatgccgcagaaagtggcgtaggcctg
attatcgttctggattgcggcatcaaggccgtagaggaaatcacatacgccaaggcgaaa
ggcatcgatttcatcatttgcgaccaccacgtacccgacgaagtgttgccccccgccgta
gccatcctgaatgccaaacgggaagacaacacctatccctacgagcacctatcgggatgc
ggcgtagggtttaagttcatgcaggcattcgccatcagcaacggcatcgaatttcaccac
ctgatacctttgctggatctctgtgctgtcagcatcgcatcggacatcgtgcccatcatg
ggcgaaaaccgtatcttggcctaccacgggctgaagcagttgaacagcaaccccagcgta
ggactgaaagcaatcatcgacgtttgcggactgacggataaggacatcaccgtgggcgac
atcgtattcaagataggtccccgaatcaatgcttccggacgcattcagaacgggaaagag
gctgtcgacctgctcacggagaaagatttctccgtggctctggagaaagccggccaaatc
aaccagtacaacgaaacccgcaaagacttggacaagaccatgaccgaagaggccaaccaa
atcgtggctggtctggacggactggccgaccgccgttccatcgtgctgtataacgaagac
tggcacaaaggtgtcataggcattgtggcttcccgcctgacggagatttattatcgcccg
gccgtagtgttgacacgcacggacgacatggccaccgggtcggcccgctccgtatcgggc
ttcgacgtatataaagccatcgaatattgtcgagacctgttggaaaacttcggtggacat
acctacgcggccggcctctccatgaaagtggaaaacgtgccggcttttatggaacgcttc
gaggaatttgtgtcgcagaacatcctgcccgaacagacttgtgccgtcatcgacatcaat
gcagaaatcgacttcaaagacatcactcccaaattctgcaacgatttgaagaagttcaat
cccttcggaccggacaataccaaacccgtattctgcacgcacaatgtctacgactacggc
accagcaaagtagtgggtcgcgatcaggagcacatcaaattagaattggtggacaacaaa
tcgaacaacgtgatgaacggcattgctttcggacaaagttcgcacgtgcgtttcatcaaa
accaagcggtcgttcgacatctgttataccatcgaggagaatacccataaacgaggagaa
atacagttgcagattgaggatataaggccggaagcctcttctcccgattccatccaatag
DBGET
integrated database retrieval system
