Bacteroides heparinolyticus: C3V43_07100
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Entry
C3V43_07100 CDS
T05405
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bhf
Bacteroides heparinolyticus
Pathway
bhf03030
DNA replication
bhf03430
Mismatch repair
bhf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3V43_07100
03430 Mismatch repair
C3V43_07100
03440 Homologous recombination
C3V43_07100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhf03032
]
C3V43_07100
03400 DNA repair and recombination proteins [BR:
bhf03400
]
C3V43_07100
Enzymes [BR:
bhf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3V43_07100
DNA replication proteins [BR:
bhf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3V43_07100
DNA repair and recombination proteins [BR:
bhf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3V43_07100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AVM57549
LinkDB
All DBs
Position
complement(1711850..1715647)
Genome browser
AA seq
1265 aa
AA seq
DB search
MQDFVHLHVHTQYSLLDGQASVSRLVDKAMKDGMKGIAVTDHGNMFGIKEFINYVNKKNS
GPKGEIKDLKKQIAGIESGNVACDDKEAELARCRAGIAEAESRLFKPIVGCEMYVARRTM
DKKEGKQDQSGYHLVVLAKNEKGYHNLIKLVSHAWTRGYYMRPRTDRSELEKYHEGLIIS
TACLGGEVPKNITNDRIEEAEEAIRWYKNIFGDDYYLELQRHKATVPRANHEAYPLQQKV
NAKILELAKKYDVKVICTNDVHFVDEENAEAHDRLICLSTGKDLDDPTRMLYTKQEWMKT
KAEMNALFADVPEALSNTLEILDKVEYYSIDHAPIMPTFAIPEEFGTEEEYRRKYTEQDL
FEEFTRDENGKTVLNEEKANAKIQQLGGYDKLYRIKLEADYLAKLAFDGAKKLYGDPLSD
EVKERLIFELYIMKTMGFPGYFLIVQDFINAARTQLGVSVGPGRGSAAGSAVAYCLGITK
IDPIQYDLLFERFLNPDRISLPDIDVDFDDDGRGEVLRWVTEKYGQEKVAHIITYGTMAT
KMAIKDVARVQKLPLSESDRLCKLVPDKIPDKKLNLQNAIAYVPELQAAEASPDPLVRDT
MKYAKMLEGNVRGTGVHACGTIICRDDITDWVPVSTADDKETGEKMLVTQYEGSVIEDTG
LIKMDFLGLKTLSIIKEAVANVRLHRGLEIDIDKVSINDPATYKLYCDGRTIGTFQFESA
GMQKYLRELQPGTFEDLIAMNALYRPGPMDYIPDFIDRKWGRKPIEYDIPIMEKYLKDTY
GITVYQEQVMLLSRLLADFTRGESDALRKAMGKKLRDKLDHMKPKFVSGGQKNGHDPQVL
EKIWGDWEKFASYAFNKSHATCYSWVAYQTAYLKANYPAEYMAAVMSRSLSNITDITKLM
DECKAMGINTLGPDVNESNLKFTVNNEGNIRFGLGAVKGVGEAAVQSIMEEREKNGPYKG
IFDFVQRVNLNACNKKNIECLALAGGFDSFSELKREQYFAANSKGEVFIETLVRYGNRYQ
MDKAAAANSLFGGENVVDIATPEIPLAERWTDLERLNKERDLVGIYLSAHPLDEYSVVLE
HVCNTRMAELEDKTALAGREITMGGIVTSVRRGISKNGNPYGIARIEDYSGSAELPFFGN
DWVTYQGYLGERTFLFIKARCQPKQWRQDELDLKITSMELLPDVKEKLIEKITILIPLGM
LDKALITELSELTKERPGSTELYFKIIDTESKMGVDFISRPIKLSVGRELISYLKEAPDL
DFRIN
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattttgttcatttacatgtgcacactcaatattctcttttagatggccaggcc
agcgtcagtcgtttggtggataaggccatgaaagacggtatgaagggaattgccgtaacc
gatcacggaaatatgttcggcattaaggaatttatcaattatgtcaacaagaagaatagt
ggtcccaaaggggaaataaaagacctcaaaaaacagattgccggcattgaaagcgggaat
gttgcatgtgacgacaaggaggcggagcttgctcgttgccgtgccggaattgccgaggcc
gaaagcagacttttcaagcctatcgtaggttgtgagatgtatgtggctcgccgcactatg
gacaaaaaggaagggaagcaagaccaaagcggttatcacttggtggtattggcaaagaac
gaaaaaggctatcataacctgataaagctcgtttcgcatgcttggacgagggggtattac
atgcgtccgcgcacagaccgtagcgagttggaaaaatatcacgaaggactgattatcagt
acagcctgtcttggtggagaggtgcctaaaaatataaccaacgaccggatagaggaagcc
gaagaagccatacggtggtataaaaatatatttggcgatgattattatctggaactccaa
cggcataaagccactgttccgcgtgccaaccatgaagcttatccgttgcaacagaaggtc
aatgccaaaattctggaacttgccaagaaatatgatgtaaaggttatttgtaccaacgac
gtacattttgtagacgaagaaaatgcagaggcgcacgaccgcttgatttgcttgagtacg
ggtaaggatttggacgatcccacccgcatgctttataccaagcaagagtggatgaagaca
aaggctgagatgaacgctttgtttgccgatgtgcctgaggctttgtccaatacgttggag
atcttggacaaggtggagtattactctatcgaccatgcgcctatcatgcccacttttgcc
atcccggaggagttcgggacagaggaggagtatcggcggaaatatacggagcaagattta
ttcgaagagtttacccgggatgaaaacgggaagacggtattgaatgaggaaaaagccaat
gccaagattcagcagctgggcggttacgataaattgtatcgtatcaagctggaagccgac
tatttggcgaagttggcatttgacggtgcaaagaagttgtatggcgaccctttgtcggac
gaggtgaaagagcgtcttatttttgagttatatatcatgaagacgatgggttttccggga
tacttcttgattgtgcaggactttatcaatgctgcccgtacgcagttgggcgtttctgtg
ggaccgggacgtggttctgcagccggttcggccgtggcgtattgcttggggattacgaaa
atcgacccgattcagtacgacttgctgttcgagcgtttcctgaaccccgaccgcatctct
ctaccggatatcgatgtggactttgatgatgacgggcgtggcgaggtgcttcggtgggtg
acggagaaatatgggcaagagaaagtggctcatatcattacgtacggcacgatggctacc
aaaatggccatcaaggatgtggctcgtgttcagaaattgcctttgagcgagtcggataga
ttgtgcaagcttgtgccggacaaaattcccgataagaaacttaatctgcagaatgccatt
gcgtatgtgcccgaattgcaggctgccgaagcatcgcccgacccgttggtgcgcgatacg
atgaagtatgccaagatgctggaaggcaacgtgcgtggtacgggtgtacatgcttgcggc
actattatttgccgcgatgatatcacggattgggtgcctgtgagcacggcagacgataag
gagacaggcgagaagatgcttgttacacaatacgagggttcggtcattgaagatacgggg
ttgatcaagatggactttctgggattgaaaactctgtccatcattaaagaggccgttgcc
aatgttcgtttgcatcgcgggttggaaatagatatagataaggtctccatcaacgaccct
gctacttataagctctattgcgacgggcgaaccattggtacgttccagtttgagtcggcc
ggcatgcagaagtatctgcgcgagttgcaacccggtacgtttgaagacttgattgccatg
aatgccctttatcgtccggggccgatggattatattccggactttatcgaccgtaagtgg
ggacgcaagcccattgagtacgatattccgatcatggagaaatacttgaaagatacgtat
ggcattacggtttatcaggagcaggtcatgctactgtctcgtttgttggccgattttacc
cgtggtgaatccgatgctttgcgtaaggctatgggtaagaaattgcgcgacaagttggat
catatgaagcctaaattcgtatcgggtggacagaagaacggacacgacccgcaagtgctt
gagaaaatttggggggattgggagaaattcgcttcttatgctttcaacaagtcgcatgcc
acatgttattcatgggtggcttatcagactgcttatctgaaagcaaactatccggcagaa
tatatggctgctgtcatgagccgaagcttgtcgaacataaccgatatcaccaagttgatg
gatgagtgcaaagctatgggcatcaatacgctggggccggatgtgaacgaaagtaacttg
aagtttacggtcaacaacgaggggaatatccgtttcggtcttggtgccgtgaaaggagtg
ggcgaggcagccgtgcagagtatcatggaagaacgtgagaaaaacggaccttataaagga
atctttgattttgtacagcgtgtcaatctgaacgcttgtaataagaaaaacatcgaatgc
ctggccttggcgggaggttttgacagtttctcggaactgaaacgtgaacagtattttgcg
gcaaattccaagggcgaggtgttcattgaaacgttggtgcgctacggcaaccgctatcag
atggataaggctgcggcagccaattcgttgttcggtggtgagaatgtggtggatattgct
acccctgaaattcctttggccgaacgttggaccgatttggagcggttgaacaaggagcgt
gatttggtgggaatctatctctctgcacatccgttggatgaatattcggttgtgctggag
catgtttgtaacacccgtatggcggaattggaagacaaaacagcgcttgccggacgtgaa
ataacgatgggaggaattgtcacctcggttcgtcgtggcatcagcaagaatggcaatcct
tatggcattgctcgaatcgaggattattccggttcggccgaacttccattcttcggtaat
gactgggtgacctatcagggatatctgggcgagcgtacattcttgtttatcaaggctcgc
tgtcagcctaaacagtggcggcaggatgagttggacttgaaaatcacctcgatggaactt
ttgcccgatgtaaaggaaaaactgattgaaaaaataacgatactcattccacttggtatg
ttggacaaggccttgattaccgagttgagcgaacttaccaaagagcgtccgggcagcacg
gaactttatttcaagataattgatacagaaagtaagatgggggtggactttatctcccgg
cctataaaactttctgtgggacgtgaactgatctcttacctgaaagaagcgcccgatctt
gattttcggattaattag
DBGET
integrated database retrieval system
