Prevotella heparinolytica: C3V43_07280
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Entry
C3V43_07280 CDS
T05405
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
bhf
Prevotella heparinolytica
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhf02000
]
C3V43_07280
Transporters [BR:
bhf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C3V43_07280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
AVM58968
LinkDB
All DBs
Position
complement(1755017..1756585)
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AA seq
522 aa
AA seq
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MRKFKKICAAFFVGLLATGCAGDYLDNEPSNSISRDKAVENTEGLRYILEGVHNMIYSYN
FSNQVFTLGQPGLNASLDLLGDDMINTKPAYHMSVYRWEDHTSPDGEINLYAWDYFYTII
QHLNEIIGAVDNVKNAAATEVATLKGEAYSLRAWAYFNLVQLYGKRYVKGEANDNLGVII
RKEVSYDARPRSTVAEVYKLIDEDIKTGLENLEKAPDLERKNVIRYSTACGIAARIALAK
SEWADAEKYADLAIKHSGATLQQGGALCDGFCDLSASEWMWGYYQGSDQDFFYASYFCAY
SYNFNGHNKGFKHAVNRTLYDKMGKNDARRGWWVCLDQGDKIPKDASASYFEGGMSKPNW
EVTGQQIKYRAKGAEDTHGDLLIMRLGEMYYIKAEAQARQGSGREADARATLLEIMSTRD
PEYKTEAVGDELMDEIFRNKRIDLWMEGQRFFDMKRLGIIPDRLNSANIQIHLKGNAQKT
AITRNSGTNAKKIAKSVDDKYWEFAIPYTEIRGNDQCVQNPL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagtttaaaaaaatatgcgcggcattctttgtcggactgctggctaccggatgt
gcgggagactacctggacaacgagccatctaactccataagccgggataaagctgtagaa
aacacagaaggactgaggtacattctggaaggggtgcacaatatgatttattcatataat
ttcagtaatcaagtattcaccctcggccaaccgggtctgaatgctagcttggacttactt
ggagatgacatgatcaacactaaaccggcctaccacatgagtgtttatcgctgggaagac
catacaagtcctgacggagaaatcaatctctatgcttgggactatttctatactatcatc
cagcatctgaacgagattatcggagcggtagataacgtgaagaatgctgcggcaacggaa
gtggctaccttgaaaggggaagcttatagcttgcgcgcatgggcttacttcaatttggtt
caactttacggcaaacgctatgtaaaaggcgaagccaatgacaatttgggagttattatt
cgtaaagaagtgtcatacgatgctcgcccgcgctctaccgtggctgaagtatataaactt
attgatgaagacattaagaccggtcttgagaatttagaaaaggctcctgacttggaacgc
aaaaacgtgattcgttattctacggcatgtggcattgccgcacgtatcgccttggcaaag
tcggaatgggcagatgccgagaaatatgcagatttggcaattaagcattcaggcgccact
ctacaacaaggtggtgcgctttgtgacggcttctgcgatttgagtgcctccgaatggatg
tggggctattatcaaggcagtgaccaggattttttctacgcaagctatttctgtgcgtat
tcttacaactttaacgggcataataaaggtttcaaacatgcggtaaaccgtaccttgtat
gacaagatgggcaaaaacgatgcacgtcgcggctggtgggtatgtttggatcaaggagat
aagattcctaaagatgccagcgcctcttactttgagggaggaatgagtaagcccaattgg
gaagttaccgggcaacaaatcaaatatcgcgccaaaggagctgaagatacgcatggagat
ttgctgattatgcggctgggagaaatgtactacatcaaagcggaagcacaagccagacag
ggttccggcagagaagccgatgcccgtgccactctattggaaatcatgagtacacgcgat
ccggaatataagacggaggctgtgggcgatgaactgatggatgagattttccgtaacaaa
cgaattgatttatggatggaagggcaacgtttctttgatatgaaacgcttgggcattatt
cccgatcgcttgaatagcgcaaatattcaaatacacttaaaaggcaatgcccaaaagact
gctatcactcgtaactcaggtaccaatgccaagaaaatagccaagtctgtagatgataaa
tattgggagtttgccattccgtatacggaaatacgtggtaatgatcaatgtgtacaaaat
cctttataa
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