Prevotella heparinolytica: C3V43_08105
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Entry
C3V43_08105 CDS
T05405
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bhf
Prevotella heparinolytica
Pathway
bhf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C3V43_08105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhf03021
]
C3V43_08105
Transcription machinery [BR:
bhf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C3V43_08105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_40
HTH_24
DUF8040
DUF722
Sigma70_ECF
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AVM57723
LinkDB
All DBs
Position
complement(1972164..1972727)
Genome browser
AA seq
187 aa
AA seq
DB search
MTAFTEIYHRYHKLLYVMSYRYLMDTEMAKDAVQHVFTRFWEYRTELRVGVSLKNYLVTM
TRNHILNVIRNENNAVAKNYGMAQDAPEYEDILVESLEKKELMSLFYKALEMLPPQKRDI
CLMKVQEELSNQEIADRLQLSINTIKTHYSEALKLLRIYLRKMLIIVTYLTLLKSLSVYL
VVWIIKS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttacagaaatttatcatagataccataagctactttacgtcatgtcgtat
cgttatttgatggatacggaaatggcgaaagatgcagtgcaacatgtttttactcgcttt
tgggaatatcgcacggaactccgtgtgggggtcagcctgaaaaactacttggtgacaatg
accaggaaccatattttgaatgtgattcgtaatgaaaataatgccgttgccaaaaactat
gggatggcacaggacgcccccgaatatgaagatattttagtggaaagcttggagaaaaaa
gagttgatgtctttattctacaaagctttggaaatgcttccacctcaaaaacgtgatatt
tgcttgatgaaagtgcaggaagaattaagcaatcaagaaatagccgatcggttgcaactc
tctatcaacaccattaaaacccactattcggaagctttgaagttactgcgtatttatttg
cgtaaaatgctaataattgttacatatctcaccttgttgaagagtttgagtgtctatttg
gttgtatggataataaaatcatag
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