Prevotella heparinolytica: C3V43_08565
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Entry
C3V43_08565 CDS
T05405
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bhf
Prevotella heparinolytica
Pathway
bhf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C3V43_08565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhf03400
]
C3V43_08565
Enzymes [BR:
bhf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3V43_08565
DNA repair and recombination proteins [BR:
bhf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C3V43_08565
RecFOR pathway proteins
C3V43_08565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
AAA_16
Mg_chelatase
TIP49
nSTAND3
TsaE
AAA_14
NB-ARC
AAA_18
Rad17
AAA_PrkA
RNA_helicase
NTPase_1
NPHP3_N
AAA_28
AAA_33
ABC_tran
AAA_17
Sigma54_activ_2
bpMoxR
AAA_24
DUF815
NACHT
Motif
Other DBs
NCBI-ProteinID:
AVM57803
LinkDB
All DBs
Position
2088795..2089826
Genome browser
AA seq
343 aa
AA seq
DB search
MEQEEFDIRNQQLTGKERDFENALRPLNFEDFSGQDKVVDNLRIFVKAARLRGEALDHVL
LHGPPGLGKTTLSNIIANELGVGFKITSGPVLDKPGDLAGILTSLEPNDVLFIDEIHRLS
PVVEEYLYSAMEDYRIDIMIDKGPSARSIQIDLNPFTLVGATTRSGLLTAPLRARFGINL
HLEYYDDDVLGGIIRRSAGILDVPCSTRAAAEIASRSRGTPRIANALLRRVRDFAQVKGS
GSIDTEIAQFSLEALNIDKYGLDEIDNKILCTIIDKFKGGPVGLTTIATALGEDAGTIEE
VYEPFLIKEGFLKRTPRGREVTELAYKHLGRNLYNSQTTLFSD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaagaatttgacatacgcaaccagcaactgacgggaaaggagcgcgatttc
gagaacgccctgcgccccctgaacttcgaggatttcagcgggcaggataaggtggtggac
aacctgcgcatctttgtaaaggcagcacgccttaggggcgaggctctggaccatgtgctg
ctgcacggccctcccggactgggaaagaccacactgagcaacatcattgccaacgagctg
ggcgtgggctttaagattacctccggcccggtgctcgacaaaccgggcgaccttgccggc
atactgacttctttagaaccgaacgatgtcctgttcatcgacgaaattcaccgcctctct
cccgtggtggaggagtatctctactctgccatggaggattaccgcatcgacatcatgata
gacaaaggcccgtcggcacgtagcatacagatagacttgaacccctttacgctggtgggc
gccactactcgcagcgggttgctcacggctcccctgcgtgcgcgcttcggcatcaacctg
catctggagtattatgacgacgacgtgctgggcggcatcatccgccgttcggcaggcatc
ctcgacgtgccctgctccacaagggcggcggcggagatagcttcgcgcagccggggcacg
ccgcgtatcgccaatgcgttgcttcgccgtgtgcgcgactttgcgcaggtgaaaggttcg
ggcagcatcgacacggaaattgcacagttctcgctggaagcgctgaacatcgacaagtac
gggttggatgagatcgacaacaagatactctgcaccattatcgacaaattcaaaggcggg
ccggtaggccttaccaccattgccaccgccttgggcgaagatgcgggaaccatcgaagag
gtgtacgagccgttcttgataaaagaaggatttctgaagcgcactccacgcggacgcgaa
gtcaccgaactggcctacaagcacttgggccgcaacctttataacagccagacaacgttg
tttagcgattag
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