Prevotella heparinolytica: C3V43_09355
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Entry
C3V43_09355 CDS
T05405
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
bhf
Prevotella heparinolytica
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhf03036
]
C3V43_09355 (xerD)
Chromosome and associated proteins [BR:
bhf03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
C3V43_09355 (xerD)
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Pox_D5
DUF4942
Motif
Other DBs
NCBI-ProteinID:
AVM57939
UniProt:
A0A2R3MT26
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All DBs
Position
complement(2303595..2304545)
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AA seq
316 aa
AA seq
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MKSEEKTKNKERQALIIRKYRQYLKLEKSLSPNTQDAYLRDLEKLLHFLDGENKSFLDTT
LDDLHRFAAGLHDIGIHPRSQARILSGVKSFFHFLVMADYLEGDPSELLEGPKIGFKLPE
VLTLDEIDLIISAVDLSKNEGQRNRAILETLYSCGLRVSELCNLKISDLYFEEGFIKVDG
KGGKQRLVPISPRAIKEIKHWFIDRNQGKIKKEFEDYLFLARWGNKISRIMVFHMIKELA
SKAGITKNISPHTFRHSFATHLLEGGANLRAIQCMLGHESIATTELYTHIDRNRLRSEII
EHHPRNIKYREEQKIH
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagaagaaaaaacaaagaataaggaaaggcaagcgctgataatcagaaagtac
cgtcaatacctgaagttagaaaaatctctttctcccaatacgcaggatgcttatctgagg
gacttggaaaagttgcttcatttccttgacggagaaaacaaaagttttctcgacactacc
ttggacgatttgcaccggtttgctgccggattgcacgatattggcattcacccccgttcg
caggcgcgtattctgtcgggtgtcaaatcgtttttccatttccttgtcatggccgattat
ctggagggtgatcccagcgaattgctcgaaggccctaaaataggattcaaactgccggaa
gtgctgacactggatgagatagacctaataatcagtgccgtggacttgagtaaaaacgaa
ggacaacgcaacagagccatcctcgaaacactgtatagctgtggtctgcgcgtgtcggaa
ctttgcaacctgaaaatttccgatctttattttgaagagggtttcatcaaagtggatggc
aagggcggcaagcagcgccttgtccccatttctccgcgtgccatcaaagaaattaagcat
tggttcatagaccgtaatcagggtaaaataaagaaggagtttgaggactatctgtttctg
gcacgttgggggaacaagatttcgcgcatcatggtatttcacatgatcaaagaactggca
agcaaggccggtatcaccaagaacatcagtccgcataccttccgccactcctttgccacc
cacctgcttgaaggaggagccaatcttcgtgccatacaatgtatgcttgggcatgaatcc
atcgcaacaacagaactttacacacacatcgaccgcaacagattgcgtagtgaaatcatt
gagcatcatccccgtaatataaagtatcgcgaggagcaaaagattcattaa
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