Prevotella heparinolytica: C3V43_10050
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Entry
C3V43_10050 CDS
T05405
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bhf
Prevotella heparinolytica
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C3V43_10050 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhf03019
]
C3V43_10050 (rnc)
03009 Ribosome biogenesis [BR:
bhf03009
]
C3V43_10050 (rnc)
03036 Chromosome and associated proteins [BR:
bhf03036
]
C3V43_10050 (rnc)
Enzymes [BR:
bhf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C3V43_10050 (rnc)
Messenger RNA biogenesis [BR:
bhf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C3V43_10050 (rnc)
Ribosome biogenesis [BR:
bhf03009
]
Eukaryotic type
90S particles
RNase
C3V43_10050 (rnc)
Prokaryotic type
rRNA processing factors
C3V43_10050 (rnc)
Chromosome and associated proteins [BR:
bhf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C3V43_10050 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DUF6857
Motif
Other DBs
NCBI-ProteinID:
AVM58056
LinkDB
All DBs
Position
complement(2488692..2489633)
Genome browser
AA seq
313 aa
AA seq
DB search
MLRNQIDKIRLLFRKDRESYFCFYRILGFFPRNIKVYQQALLHKSTSLRSEKGRPINNER
LEFLGDAILDAIVGDIVYKHFEGRREGFLTNTRSKIVQRETLNKLAVEIGLDKLVKYSTR
SSSHNSYMYGNAFEAFIGAIYLDRGYDRCRQFMEKKIFKNHIDLDKMSRKEVNFKSRLIE
WSQKNKMEVSFELIEQLLDKDYNPMFHTEVRIEGLSAGTGTGYSKKESQQNAAQMALKKI
KNDNDFMEEILAAKEQNSPAEVEEVKEEMAETEGAENTEYDFSNPDEETEKALMAEPEEE
SSEANPHSAPLNH
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgttacgtaaccaaatagataaaataaggctcttgttccgcaaggacagagagtcttat
ttttgtttttacagaatcctcggattctttccccgcaacatcaaagtctaccagcaagcc
ctgctgcacaagtccacctccctgcgctcggagaaaggacgccccatcaacaacgaacgg
ctggagtttctgggcgacgccatcctcgacgccatcgtgggcgacatcgtctacaagcat
ttcgaaggtcgtcgcgaaggcttcctcaccaacacccgctccaaaatcgtgcagcgcgaa
acgctgaacaagctcgccgtggaaatcggtctggacaagctggtgaagtattccacccgc
tcctcctcgcacaacagctacatgtatggaaacgccttcgaggcgttcatcggcgccatc
tatttagaccggggctacgaccgttgcaggcagttcatggagaagaagattttcaaaaac
cacatcgacctcgacaaaatgtcgcgcaaagaggtgaacttcaagtcgaggctcatcgaa
tggagccagaagaacaagatggaggtatccttcgagcttatcgaacagttgctcgacaag
gactacaacccgatgttccacaccgaagtgcgcatcgaaggcctgtcggccggcaccggc
acgggatactccaagaaagagtcgcaacagaacgccgcgcaaatggcactgaagaaaatc
aagaacgacaacgacttcatggaagaaatcctcgcagccaaagagcagaacagcccggca
gaggtggaggaggttaaagaagagatggcggagacggaaggcgccgaaaacaccgaatac
gacttctccaaccccgatgaagagacggagaaagcacttatggcagaaccggaagaagaa
tcatccgaagcaaatccccattctgcgcccctgaaccactaa
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