Prevotella heparinolytica: C3V43_11300
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Entry
C3V43_11300 CDS
T05405
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bhf
Prevotella heparinolytica
Pathway
bhf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3V43_11300 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhf03019
]
C3V43_11300 (pnp)
03016 Transfer RNA biogenesis [BR:
bhf03016
]
C3V43_11300 (pnp)
Enzymes [BR:
bhf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C3V43_11300 (pnp)
Messenger RNA biogenesis [BR:
bhf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C3V43_11300 (pnp)
Transfer RNA biogenesis [BR:
bhf03016
]
Prokaryotic type
tRNA degradation factors
C3V43_11300 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
ATP-cone
MazE_antitoxin
RNase_II_C_S1
DUF1722
Motif
Other DBs
NCBI-ProteinID:
AVM58271
LinkDB
All DBs
Position
complement(2815396..2817585)
Genome browser
AA seq
729 aa
AA seq
DB search
MINPIVKTIELPDGRTITLETGKLAKQADGSVMLRMGNTMLLATVCAAKDAVPGTDFMPL
QVEYKEKFSAFGRFPGGFTKREGRASDYEILTCRLVDRALRPLFPDNFHAEVYVNIILFS
ADGVDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQFVINPTFEQLEKADMDLMV
GATYENIMMVEGEMNEVSEQDLLEAMKAAHEAIKIQCKAQMELAEEVGSTVKREYCHEVN
DEELRKAVHDACYEKAYAVAASGNNNKHERINAFETICEEFKAQFSEEELEEKGALIDRY
YHDVEKEAMRRSILDEGKRLDGRKTTEIRPIWCETDYLPGPHGSAIFTRGETQSLSTVTL
GTKLDEKIIDDVLEHGKERFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRALKGQIP
ADYPYVVRIVSDILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIKNPGEEKYA
VLSDILGDEDHLGDMDFKVTGTKDGITATQMDIKCDGLTYDILEKALLQAKEGREFILGK
ITECIAEPRTDLKPHAPRIETMTIPKEFIGAVIGPGGKIIQGMQEETGATITIEEVDNVG
KIEIAGTNKKSIDDAMRLIKSIVAVPEIGEIYKGKVRSVMPYGAFVEFLPGKDGLLHISE
IDWKRLETVEEAGIKEGDELEVKLLEIDPKTGKFKLSRKVLLPKPEGYVERSERNGERRE
RRDRGNRNE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgattaacccaattgttaagacaatcgagcttccagatggcagaaccatcacgctcgaa
acgggaaagctggcaaaacaggcagacggttctgtaatgcttcgcatgggcaacaccatg
cttttagctactgtttgtgccgccaaggacgcagttcccggaacagatttcatgccgcta
caggtagagtacaaagaaaaattctcggcattcggccgtttccccggcggtttcaccaaa
cgtgagggccgcgcctctgactacgagatcctcacttgccgactcgttgaccgtgctctc
cgccccttattccctgacaattttcatgcagaggtatatgtaaacattatcctcttctcg
gccgacggcgtagacatgccggatgctttggccggccttgcagcctctgccgcacttgct
gtttcagatattcctttcaacggaccgatttccgaagtacgtgtagcacgtattgacgga
cagttcgttatcaaccccactttcgaacaactggaaaaagccgacatggatctgatggtg
ggtgccacatacgaaaacatcatgatggtggaaggcgaaatgaacgaggtttccgagcaa
gatttgctggaagccatgaaagccgcacacgaagctatcaagatacaatgtaaagctcag
atggagctggcagaagaagtaggttctaccgtaaaacgtgaatactgccacgaagtgaac
gatgaagagcttcgcaaggctgttcacgatgcttgctacgaaaaggcttatgccgttgca
gcatcgggcaataacaataagcacgaacgcatcaatgcttttgagactatctgcgaagag
ttcaaagcccaattctcggaagaagagctggaggaaaagggcgcgctgatagaccgttat
tatcacgatgtggaaaaagaagccatgcgccgttccattctggacgaaggcaagcgtctt
gacggacgtaagactaccgaaatacgccccatctggtgcgaaaccgattatttgccgggt
cctcacggttcggcaatcttcacacgcggagagacccaatctttgtctaccgttacttta
ggaacgaaactggacgagaagatcatcgacgacgtattggaacatggcaaagagcgcttc
ttgcttcactataacttcccgccgttctctacgggcgaagcgaaagcacagcgtggtgtg
ggtcgtcgcgaaatcggccacggacacttggcatggcgtgcgttgaaaggtcaaatccct
gcagactatccttatgtagtgcgcatcgtatcggatatcctcgaatcaaacggttcttct
tcgatggctaccgtatgtgccggaacacttgcattgatggatgccggtgtaaaaatcaag
aagccggtatcgggcatcgcaatgggactgatcaagaatccgggcgaagaaaaatatgcc
gtattgtccgatatcctcggcgacgaagaccacttgggcgatatggacttcaaggtgacg
ggaaccaaagacggtatcactgccactcaaatggacatcaagtgcgacggactgacgtat
gacattttggagaaagccctgttgcaagccaaagagggccgcgaatttatcctcggaaaa
atcaccgagtgcatcgccgagcctcgcacagacctgaaacctcatgcgccgcgtatcgaa
acaatgaccattcctaaagaattcatcggtgccgtcatcggtccgggtggaaaaatcatc
caaggcatgcaggaagaaaccggagctaccatcacgattgaggaagtggataacgtgggc
aaaattgaaattgccggaacaaacaagaaaagcatcgacgacgccatgcgtcttatcaaa
agcatcgtagccgtacccgaaataggcgaaatctacaaaggtaaagtgcgcagcgttatg
ccttacggtgcattcgtagagttcttgccgggaaaagacggcctgctccacatctccgag
atagactggaaacgtttggaaacagtagaggaagccggaatcaaggaaggtgacgagttg
gaagtaaaactgctggaaatcgatccgaaaaccggtaagttcaaactgtcccgcaaagtt
ttgttgccgaaaccggaaggttatgttgaacgctccgaaagaaacggcgaacgccgcgaa
cgtcgtgacagaggtaacagaaacgagtga
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