Bacteroides heparinolyticus: C3V43_12835
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Entry
C3V43_12835 CDS
T05405
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bhf
Bacteroides heparinolyticus
Pathway
bhf00300
Lysine biosynthesis
bhf00470
D-Amino acid metabolism
bhf01100
Metabolic pathways
bhf01110
Biosynthesis of secondary metabolites
bhf01120
Microbial metabolism in diverse environments
bhf01230
Biosynthesis of amino acids
Module
bhf_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C3V43_12835 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C3V43_12835 (lysA)
Enzymes [BR:
bhf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C3V43_12835 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AVM58530
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All DBs
Position
3204828..3205988
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AA seq
386 aa
AA seq
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MKGIFPINKFRDLRTPFYYYDTKVLRDTLACIREEVAKYGNYAVHYAVKANANPKVLAII
RENGLGADCVSGGEIHAAIKAGFPADKIVFAGVGKADWEINLGLDHDIFCFNVESVPELE
IINELAGAKGKMPNVAFRINPNVGAHTHANITTGLAENKFGISMQDIDHVIDVAQGMKNV
CFIGLHFHIGSQILDMGDFVALCNRVNELQDKLEARRIRINHINVGGGLGIDYGHPNRQP
VPDFRSYFELYDNHLNLRPHQTLHFELGRSVVGQCGSLISRVLYVKQGANKQFAILDAGM
TDLIRPALYQAYHKIENITSDDQMQTYDVVGPICESSDVFGKAVDLNGVRRGDFIALRSA
GAYGEIMASGYNCRELPKGYTSDELV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaatatttcccatcaataaatttcgagacttacgtacgcccttctattattat
gatacgaaggtattacgcgatacgcttgcctgcattcgtgaggaggtggcaaagtatggt
aactatgcagtgcattatgctgtaaaggcgaatgcgaatcccaaagttcttgccattatt
cgcgagaatggacttggcgccgattgcgtgagcggcggtgagattcatgcagctatcaaa
gcgggtttcccggccgataaaatagtatttgcgggtgttggaaaagccgattgggaaatt
aatctgggattagatcatgatatcttttgttttaatgtagagtctgttccggagctggaa
attatcaatgaactggcgggagctaaaggaaaaatgcccaatgtggcattccgtatcaat
cccaatgtaggtgctcatactcatgcaaatatcactaccggattggccgaaaacaagttt
ggtatcagtatgcaggatatcgatcatgtgattgatgttgcacaagggatgaagaatgta
tgtttcatcggattacattttcatattggttctcaaatattggatatgggcgattttgtg
gctttgtgcaatcgtgtcaatgaattgcaggataagttggaagcacgccgtatccgtatc
aaccatatcaatgtcggtggagggctgggaattgactacggtcatcccaatcgccagccg
gtacccgattttcggagctatttcgaattatacgataaccatttgaatttacgtcctcac
cagacacttcattttgagttgggacgttctgtggtagggcagtgcgggtctttgatttca
cgtgtgctctatgtgaagcaaggcgccaataagcaatttgccattttagatgccggtatg
acggatttgattcgcccggcactttatcaggcttatcataagatagagaatatcacatcg
gatgaccaaatgcagacttatgatgtggtggggcctatatgcgagtcatccgatgtgttt
ggcaaggccgttgatttgaatggtgtgagacgtggggactttatcgccctccgttcggcg
ggcgcttacggtgaaattatggcttcgggttataattgtcgggagttaccgaaagggtat
acttcggatgagttagtatga
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