Bacteroides heparinolyticus: C3V43_14320
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Entry
C3V43_14320 CDS
T05405
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bhf
Bacteroides heparinolyticus
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhf03009
]
C3V43_14320
Enzymes [BR:
bhf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
C3V43_14320
Ribosome biogenesis [BR:
bhf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C3V43_14320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
ThiS
Motif
Other DBs
NCBI-ProteinID:
AVM58768
LinkDB
All DBs
Position
3513695..3515107
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AA seq
470 aa
AA seq
DB search
MSTENEIWRDASSSEENSEAGRDGNQFNREGNYSRPSYNREGGERPYRPRFASENSDRPQ
RPYGGERSYRPRFNPNAEGGDRPQRSYNSDRPYRPRYNAEGGEHMQRSYGNSTGDRPYRP
RYNNENGDRPYRPRYNAEGGDRPQRPYNNDRPYRPRFNPNVEGDDRPQRPYGNPTGDRPY
RPRFNPGSGRPGGYGNKDSYSRPIRRSADYDPNAKYSKKKQMEYKEQFVDPNEPIRLNKF
LANAGVCSRREADEFITAGVVSVNGEVVTELGTKIKRGDEVKFHDQLVNIERKVYVLLNK
PKDTVTTSDDPQARRTVMDLVKGACDERIYPVGRLDRNTTGVLLLTNDGDLASKLTHPKY
LKKKIYHVHLDKNLTKADMEQIASGIQLDDGEIHADAISYTDEQKKNDIGIEIHSGKNRI
VRRIFESLGYKVVKLDRVFFAGLTKKGLRRGEWRYLSEPEVNFLRMGSFE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaaaatgaaatctggcgtgatgcttcttcctcagaggagaactcagaggcc
ggccgtgatggtaaccaatttaacagagaagggaattatagtcgtccgtcttataaccgt
gaaggtggtgagcgtccctatcgtcccagatttgcgagtgagaacagtgatcgtccgcaa
cgcccttacggtggcgagcgttcctatcgtccacgctttaacccgaatgctgaaggcggt
gaccgtccgcagcgctcttataacagcgatcgcccgtatcgtccgcgctataatgctgaa
ggtggagagcacatgcaacgttcttatggaaactccacaggcgaccgtccataccgcccg
cgttataacaacgagaacggcgaccgtccttatcgtccgcgctacaatgccgaaggtggc
gaccgcccgcagcgtccttataacaacgatcgtccttatcgtccgcgctttaacccgaat
gttgaaggcgatgaccgtccgcaacgtccttatggaaatcctacgggtgaccgtccttat
cgtccacgctttaatccaggttctggcagaccgggtggatatggtaacaaggatagttat
agccgtcctattcgtcgctcggccgactacgatccgaatgctaaatatagcaagaagaag
cagatggagtataaagagcagtttgtcgatcctaacgaacccatccgtttgaacaagttt
ttggcgaatgccggtgtttgctcacgtcgtgaggctgatgagtttatcacggccggagtg
gtttcggtgaatggagaagtagtgaccgaattgggtaccaagattaaacgtggcgatgaa
gtgaagttccatgatcagctcgtaaacatagagcgtaaggtatatgttctgctcaataaa
ccgaaagacactgtgactacttcggatgatccgcaagcgcgtcgcacggtgatggatttg
gtaaaaggggcctgtgacgagcgtatctatccggtggggcgtctcgaccgtaatactacg
ggggtattactgctgacgaatgatggtgatttggcttccaaactgacacatcccaagtat
ctgaagaagaagatatatcatgtgcatttggataagaacctgacaaaagccgatatggaa
cagattgcgtccggcattcaattggacgatggagaaatccacgcagatgccatcagttat
acggatgagcaaaagaaaaacgacatcggtattgagattcattcgggcaagaaccgcatt
gtgcgtcgtatctttgaatcgttgggctacaaagtggtgaagttggatcgtgtgttcttc
gcaggtctgaccaagaaaggattgcgtcgcggcgagtggcgttatctctcagagccggaa
gtaaatttcctgcgcatgggttcttttgagtaa
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