Burkholderia humptydooensis FDAARGOS_899: I6G56_04050
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Entry
I6G56_04050 CDS
T08266
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bhg
Burkholderia humptydooensis FDAARGOS_899
Pathway
bhg02020
Two-component system
bhg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bhg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6G56_04050
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I6G56_04050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhg03021
]
I6G56_04050
Transcription machinery [BR:
bhg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6G56_04050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
HTH_Crp_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QPS44284
UniProt:
A0A7U4P6B6
LinkDB
All DBs
Position
1:complement(564879..566387)
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AA seq
502 aa
AA seq
DB search
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVATAIAQNPLLESDDDWIASPLRV
AADGSVIAQTPAPSAPEPMAGASNGTTATNERTERDEAAGVDEYDSYSADSGDANQWNLD
DFGRSPAASDDDDLPPMQIHETSTSLRDHLMAQLRVTQASPRDRALVTFLIESLDDDGYL
TASLEEVLADLPEELEVDVDELNAALALVHSFDPAGVGARSASECLKLQLLRLDPSPTRT
LALDIVSQHLELLAARDFTRLRKQLKATDDELRDAHALIRSLEPFPGAAYGKAEADYVVP
DIIVKKTGQNWQAELNPEVVPKLRINHLYANILRNSRGDPSTGSLKQQLQEARWLIKNIQ
QRFETILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYMLTPF
GTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDPKSPLSDSRIAELLAEQGFVVA
RRTVAKYREALKIPAVNLRKSL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagtctccaacttcgcctgtcgcagcatctcgcgctcacgccccagcttcag
cagtcgatccggctgctgcagttgtcgacgctcgaactgcagcaggaagtcgcgacggcg
atcgcgcagaacccgctgctcgaaagcgacgacgactggatcgcgagcccgttgcgcgtc
gcggccgacggctcggtgatcgcgcagacgcccgcgccgtccgcgcccgagccgatggcg
ggcgcgtcgaacggcacgactgcgacgaatgagcgcaccgagcgcgacgaagccgccggc
gtcgacgaatacgacagctattcggccgacagcggcgacgcgaaccagtggaacctcgac
gatttcggccgctcgcccgccgcgtccgacgacgacgatctgccgccgatgcagatccac
gaaacgtcgacgtcgctgcgcgatcatctgatggcgcagttgcgcgtcacgcaggcgagc
ccgcgcgatcgcgcgctcgtcacgttcctgatcgaatcgctcgacgacgacggctatctg
accgcgtcgctcgaggaagtgctcgccgatctgcccgaggagctcgaagtcgacgtcgac
gaactgaatgcggcgctcgcgctcgtgcacagcttcgatcccgcgggcgtcggcgcgcgc
tccgcatccgaatgcctgaagctgcaactgctgcgcctggatccgtccccgacgcgcacg
ctcgccctcgatatcgtgtcgcagcatctcgagctgctcgccgcgcgcgatttcacgcgc
ctgcgcaagcaactgaaggcgaccgacgacgagctgcgcgacgcgcacgcgctgatccgc
tcgctcgagccgttccccggcgcggcatacggcaaggccgaagccgattacgtggtgccc
gacatcatcgtgaagaagaccggccagaactggcaggcggaactcaatccggaagtggtg
ccgaagctgcggatcaaccatctttacgcgaacatcctgcgcaacagccggggcgatccg
agcacgggatcgctgaagcagcagcttcaggaagcgcgctggctgatcaagaatattcag
cagcgattcgagacgatcctgcgcgtcgcgcaggcgattgtcgaacgtcagaagaatttc
tttgcgcacggcgaaatcgcgatgcgccccttggttttgcgggaaatagctgatacgctg
ggcctacacgaatcgactgtctcccgtgtgacaaccggcaagtacatgctgaccccgttc
ggcacgcttgaatttaagtacttcttcggatcgcacgtatcgacagacaccggaggcgcc
gcgtcgtcgacagcgatccgcgccctcatcaaacaactgataggagccgaagaccccaaa
tcccctctttcggacagtcgcatagccgagctgctagcggaacaagggttcgtggtcgcg
cgccgcacggttgccaaatatcgcgaagccctcaagatcccggcggtgaatctgcgcaag
tctctgtag
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