Burkholderia humptydooensis FDAARGOS_899: I6G56_06720
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Entry
I6G56_06720 CDS
T08266
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bhg
Burkholderia humptydooensis FDAARGOS_899
Pathway
bhg03030
DNA replication
bhg03430
Mismatch repair
bhg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6G56_06720 (dnaE)
03430 Mismatch repair
I6G56_06720 (dnaE)
03440 Homologous recombination
I6G56_06720 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhg03032
]
I6G56_06720 (dnaE)
03400 DNA repair and recombination proteins [BR:
bhg03400
]
I6G56_06720 (dnaE)
Enzymes [BR:
bhg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6G56_06720 (dnaE)
DNA replication proteins [BR:
bhg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6G56_06720 (dnaE)
DNA repair and recombination proteins [BR:
bhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6G56_06720 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
QPS44779
UniProt:
A0A7U4SSQ8
LinkDB
All DBs
Position
1:1156568..1160092
Genome browser
AA seq
1174 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRLDDIVKSAAEDGQGALALTDLGNAFGLVRFYKEARGA
GIKPIAGCDVWITNHDDRDKPSRLLLLVKDKRGYLNLCELLSKAWLTNQYRGRAELDANW
LEGDLAAGLLALSGAQQGDIGLALAAGNEAAARRHAQRWSQVFPGGFYIELQRHGQPGAE
AYIQQAVTIAAELMLPVVATHPLQYMTADDFTAHEARVCISEGDILANPRRQKRFTTEQF
FRTQDDMVALFADLPSALANTVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQLSQE
GLEKRLVQLYPDEAEREAQRDKYSQRLDFECGTIKKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYSLGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPLLQERYDNEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWSLAQVPLDDPTSFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VEYPDMRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAQHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCDVNGIAVLPPDINQSHYRFEPVAQADGKRSCTIRYGLGAIK
GSGQNAIEEILRAREEKPFADLFDFCERIDRRIVNRRTIEALIRAGALDSLHANRAQLLA
SVPLAMEAAEQAAANALQAGLFDIGGVPAHQHALVDEPAWDDKRRLQEEKSALGFYLSGH
LFDAYRDEVRRFVRQKLGELKEGRDKVVAGVIASLRTQMTQRGKMVIALLDDGTGQCEVT
VFNEQFDVNRALFKEDELLIVQGQARNDAFTGGIRFTADSVMDLERARSRYAQAVRMTMN
GNADAAALRRVLEAHVAKADDTPPAEAPAPRGGREGGRRAQVVIPNGLVVRIAYSNARAQ
GEMRLGDAWRVKPSDALLADLRAAFGGSVVEIVY
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgtttcgttcatcttcgcgttcactccgaattctcgattgccgacggc
atcgtgcgtctcgacgatatcgtcaagtcggcggccgaagacggtcagggcgcgctcgcc
ctgaccgatctcggcaacgcgttcggtctcgtccgtttctacaaggaagcccgcggcgcg
ggcatcaagccgatcgccggctgcgacgtctggatcaccaaccacgacgatcgcgacaag
ccgtcgcggctgctgctgctcgtcaaggacaagcgcggctacctgaacctctgcgagctg
ctgtcgaaggcgtggctcacgaaccaataccgcggccgcgcggagctcgacgcgaactgg
ctcgaaggcgatctcgccgcagggctgctcgcgctgtccggcgcgcagcagggcgacatc
ggcctcgcgctcgcggcgggcaacgaggcggccgcgcgccgccacgcgcagcgctggtcg
caggtgttcccgggcggcttctatatcgaattgcagcgccacggccagccgggcgcggaa
gcgtacatccagcaggcggtgacgatcgcggccgagctgatgctgcccgtcgtcgcgacg
catccgctgcagtacatgacggctgacgacttcaccgcgcacgaggcgcgcgtgtgcatc
tcggaaggcgacattctcgcgaatccgcgccgccagaagcgcttcacgaccgagcagttc
ttccgcacgcaggacgacatggtcgcgttgttcgccgatctgccttcggcgctcgcgaac
acggtcgagatcgcgaagcgctgcaacctgacgctcgagctcggcaagccgaaactgccg
ctcttcccgacgcccgacggcatgtcgctcgacgactacctcgtgcaactgtcgcaggaa
gggctcgagaagcgcctcgtgcaactctatccggacgaggccgagcgcgaagcgcagcgc
gacaagtacagccaacgtctcgatttcgagtgcggcacgatcaagaagatgggctttccg
ggctacttcctgatcgttgcggacttcatcaactgggcgaagaacaacggcgtgccggtg
gggccgggccggggctcgggcgcgggctcgctcgtcgcgtattcgctcggcatcacggac
ctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaatccggagcgggtgtcg
atgcccgacttcgacatcgacttctgccagcacgggcgcgatcgcgtgatccagtacgtg
aaggagaagtacggcgcggacgcggtgtcgcagatcgccaccttcggcacgatggccgcg
aaggcggccgtgcgcgacatcggccgcgtgctcgacttgggctacatgttcaccgacggc
gtcgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgatgcgatgaag
gaagagccgctcctgcaggagcgctacgacaacgaggacgaagtccaccagttgctcgat
ctcgcgcagcgcgtcgagggcttgacgcgcaacgtcgggatgcacgcgggcggcgtgctg
atcgcgcccggcaagctgaccgacttctgcccgctctacacgcagggcgacgacggcggc
gtcgtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctggggctgaccacgctgacgatcctcgactgggccgagcgctacatccgccggctcgat
ccgtcgaaggccgactggtcgctcgcgcaggtgccgctcgacgatccgacgtcgttccag
atcctcaagaaggccaacacggtcgccgtgttccagttggaaagccgcggcatgcagggc
atgctgaaggatgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cgaccgggcccgatggacctgattccgagcttctgcgcgcgcaagcacgggcgcgagaag
gtcgagtatcccgacatgcgcgtcgaacccgtcctgaaagagacctacgggatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcg
gacttgctgcgccgcgcgatgggcaagaagaagcccgaggagatggcccagcatcgcgag
atcttcgcggagggcgccgcgaagaacggcctcacgcgcgagaagtccgacgagatcttc
gacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggctgcgtacgcg
ctgctcgcgtactacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcgac
gtcaacggcatcgccgtgctgccgcccgacatcaatcaatcgcattaccgcttcgagccg
gtcgcgcaagccgacggcaagcgttcgtgcacgatccgctacggcctcggcgcgatcaag
ggcagcggccagaacgcgatcgaggagatcctgcgcgcgcgcgaggaaaagccgttcgcc
gatctgttcgatttctgcgagcggatcgaccggcgcatcgtgaaccgccgcacgatcgag
gcgctgatccgcgcgggcgcgctcgattcgctgcacgcgaaccgggcgcaattgctcgcg
tcggtgccgctcgcgatggaagccgccgagcaggcggccgcgaacgcgctgcaggcgggc
cttttcgacatcggcggcgtgcccgcgcaccagcacgcgctcgtcgacgagcccgcctgg
gacgacaagcgccgcctgcaggaggagaagagcgcgctcggcttctatctgtccggccac
ctgttcgacgcgtatcgcgacgaggtgcgccgtttcgtgcgccagaagcttggcgagctg
aaggaagggcgcgacaaggtggtggccggcgtgatcgcgtcgctgcgcacgcagatgacg
cagcgcggcaagatggtgatcgcactgctcgacgacggcactggccagtgcgaagtcacc
gtgttcaacgagcagttcgacgtgaaccgcgcactcttcaaggaagacgaactgctgatc
gtccaggggcaggcgcgcaacgacgcgttcacgggcgggatccgcttcaccgccgattcc
gtgatggatctcgagcgcgcgcgcagccgctacgcgcaggcggtgcggatgacgatgaac
ggcaacgcggacgcggcggcgctgcgccgcgtgctcgaagcgcacgtcgcgaaagccgac
gacacgccccccgccgaggcgccggcgccgcgcggcggccgcgaaggcgggcggcgcgcg
caggtggtgataccgaacggcctcgtggtgcggatcgcctacagcaatgcgcgcgcgcag
ggcgagatgcgcctgggcgacgcgtggcgcgtgaagccgagcgacgcgctgctcgccgac
ctgcgcgcggcgttcggcggcagcgtcgtcgagatcgtctactga
DBGET
integrated database retrieval system
