Burkholderia humptydooensis FDAARGOS_899: I6G56_09740
Help
Entry
I6G56_09740 CDS
T08266
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bhg
Burkholderia humptydooensis FDAARGOS_899
Pathway
bhg02024
Quorum sensing
bhg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G56_09740 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6G56_09740 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhg03019
]
I6G56_09740 (hfq)
03036 Chromosome and associated proteins [BR:
bhg03036
]
I6G56_09740 (hfq)
Messenger RNA biogenesis [BR:
bhg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
I6G56_09740 (hfq)
Chromosome and associated proteins [BR:
bhg03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
I6G56_09740 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Mucin-like
Hfq_1
SelB_WH1
Motif
Other DBs
NCBI-ProteinID:
QPS45309
UniProt:
A0A7U4P4I0
LinkDB
All DBs
Position
1:complement(1827921..1828517)
Genome browser
AA seq
198 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGGRGPRAGGPHGGGGRPGGREGGGHGPYGSHGGPRGEGGGYGARE
SRGDGGYGSREPRGDGGYGSREPRGDGGYGAREPREPRESYGAPQEGASAPSGTQERNGN
GPVIVTRRRRSLGPTDGQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgcctgacgggatgcatcgagtcg
ttcgaccagtacctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggcggccgcggcccg
cgcgcgggcggcccccacggcggcggcggtcgccccggcggccgcgaaggtggcggtcac
ggtccgtacggctcgcacggcggcccgcgcggcgaaggcggcggctatggcgctcgcgaa
tcgcgcggcgatggcggctatggctcccgcgaaccgcgcggcgacggcggctacggctcg
cgcgaaccccgcggcgacggcggctatggcgcgcgcgaaccgcgcgagccccgcgagtct
tacggcgcgccgcaagaaggcgcatcggcgccctccggcacgcaggagcgcaacggcaac
ggccccgtgatcgtcacgcgccgccgccgttcgctcggtccgaccgacggccaataa
DBGET
integrated database retrieval system
