Burkholderia humptydooensis FDAARGOS_899: I6G56_12000
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Entry
I6G56_12000 CDS
T08266
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
bhg
Burkholderia humptydooensis FDAARGOS_899
Brite
KEGG Orthology (KO) [BR:
bhg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhg03021
]
I6G56_12000 (rpoS)
Transcription machinery [BR:
bhg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6G56_12000 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
HTH_Crp_2
KORA
Motif
Other DBs
NCBI-ProteinID:
QPS42348
UniProt:
A0A7U4P3R4
LinkDB
All DBs
Position
1:complement(2352388..2353476)
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AA seq
362 aa
AA seq
DB search
MPKSKRHDPQAESEKISRATQASAERAGASTDEDEDAADSERDYEPRDADSDDSGEGRSD
AADASPDLDDFRALLQAELTADTIQHYLNRISVKPLLTVEEEQRYSRLAKAGEFEARQVM
IERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSI
ERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSLSTGAAAERREASIDDIAYLTGKTA
EEVTDILALNEHTASLDAPLDLDPASSLLDLLPDDQSQSPDAEVQHRELETLTRAWLSRL
SDKHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDA
VL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatcgaagcgccacgatccgcaagccgagtctgagaagatcagtcgagccacg
caagcatcggcggagcgagctggcgcttcgacggacgaggacgaagacgctgccgacagc
gaacgcgactacgagccgcgcgacgcggattcggacgattcgggcgaagggcgcagcgac
gcggccgacgcgtcgcctgatctggacgacttccgggcgcttctgcaggcggagctcacc
gccgacacgatccagcactacctgaaccgcatcagcgtgaagccgctgctgacggtcgag
gaagagcagcgctattcgcggctcgcgaaggcgggcgaattcgaggcgcggcaggtgatg
atcgagcgcaacctgcggctcgtcgtcagcatcgcgaaaggctatctgaatcgcggcgtg
ccgctcctcgatctgatcgaagagggcaacctcgggctcatgcacgcgatcgagaaattc
gatccgacgcgcggctttcgcttctcgacatatgcgacctggtggatccgccagagcatc
gagcgcgcgatcatgaatcaggcgcgcaccgtgcggctgccggtgcacgtgatccgcgag
ctgaaccaggtgctgcgcgcgaagcgacatctggagaagaactcgctgtcgacgggcgcg
gcggccgagcgccgcgaggcgagcatcgacgacatcgcgtatctgaccggcaagacggcc
gaggaagtcaccgacatcctcgcgctgaacgagcacaccgcgtcgctcgacgcgccgctc
gatctcgatccggcgagcagcctgctcgatctgctgcccgacgaccagagccagtcgccc
gacgctgaggttcagcaccgcgaactggagacgctgacgcgcgcgtggctgtcgcgcctg
tccgacaagcatcgccacgtgatcgagcggcgcttcggcctcaaccatatcgaacccgcg
acgctcgaggagcttgccgacgagatggggctgacccgcgaacgggtccgccagatccag
caggaagcgctcgtgcggctcaagcggttttttgcctccaacggcgtgcgcaaggacgcc
gttctgtaa
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