Burkholderia humptydooensis FDAARGOS_899: I6G56_15400
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Entry
I6G56_15400 CDS
T08266
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bhg
Burkholderia humptydooensis FDAARGOS_899
Pathway
bhg03030
DNA replication
bhg03430
Mismatch repair
bhg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6G56_15400
03430 Mismatch repair
I6G56_15400
03440 Homologous recombination
I6G56_15400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhg03032
]
I6G56_15400
03400 DNA repair and recombination proteins [BR:
bhg03400
]
I6G56_15400
Enzymes [BR:
bhg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6G56_15400
DNA replication proteins [BR:
bhg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6G56_15400
DNA repair and recombination proteins [BR:
bhg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6G56_15400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QPS42951
UniProt:
A0A7U4SRL7
LinkDB
All DBs
Position
1:complement(3077255..3078394)
Genome browser
AA seq
379 aa
AA seq
DB search
MSASPLLHPAIDTPLAFVDLETTGGSAAEHRITEIGVVVVNASHVSTWTTLVDPRQPIPP
FIQQLTGITDAMVRGAPTFADIASALFERLDGKLFVAHNASFDRGFLRAEFERAGVAFNP
DVLCTVRLSRALFPRESRHGLDALIERHALAPSARHRALADADLIWQFWQKLHDAIPAER
LREQIARTTRRFRLAGELTEAYLESAPAGCGVYALFGDDDAPLYVGRSVRVRQRLRALLT
GERRSAKEMRLAQLVRRVEWRETGGELGALLAEADWIASLAPSFNRRPDRSAAGAAHWPF
DGPVAFEERGESSVFHVVDRWRYVGAASSLEQAAALAADARAAGEGMSDAAPAVRRILQT
HLARGLELIPLAGAAPAAA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcgccgctgcttcatcccgcgatcgacacgccgctcgcgttcgtcgacctc
gaaaccaccggcggctcggccgccgagcatcgcatcaccgaaatcggcgtcgtcgtcgtg
aatgcgagccacgtgtcgacgtggacgacgctcgtcgatccgcggcagccgattccaccg
ttcatccagcaactcacgggcatcaccgacgcgatggtgcgcggcgcgccgacgttcgcc
gacatcgcgtccgcgttgttcgagcggctcgacggcaaactcttcgtcgcgcacaacgcg
agcttcgaccgcggcttcctgcgcgcggagttcgagcgcgcgggcgtcgcgttcaatccc
gacgtgctttgcacggtgcggctgtcgcgcgcgctttttccgcgcgagtcgcgccacggg
ctcgacgcgctgatcgagcggcacgcgctagcgccgtcggcgcgccaccgggcgcttgcc
gacgccgatctcatctggcagttctggcaaaaattgcacgacgcgatacccgccgagcgg
ctgcgcgagcagatcgcgcgcacgacgcgccggttcaggctcgccggggagttgacggaa
gcgtatctggaaagcgcgcccgccggctgcggcgtctacgcgctgttcggcgacgacgat
gcgccgctctatgtcggtcgcagcgttcgggtccgccagcggttgcgcgcgctgctgacg
ggcgagcgacgctcggcgaaggaaatgcggctcgctcaactggttcggcgcgtcgaatgg
cgcgagacgggcggcgagctcggcgcgctgctggccgaggcggactggatcgcgtcgctc
gcgccgtcgttcaaccggcggccggaccggagcgccgcgggcgcggcgcactggccgttc
gatgggccggtcgcgttcgaggagcgcggcgagtcgagcgtcttccatgtggtcgaccgt
tggcgctacgtcggcgcggcatcgtcgctcgagcaggcggcggcgctcgcggccgatgcg
cgcgcggcgggcgagggcatgtcggacgccgcgccggcggtgcgccgcattctgcagacg
catctcgcgcgcgggctcgagctgattccgctcgcgggcgccgcgcctgccgcagcctag
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