Burkholderia humptydooensis FDAARGOS_899: I6G56_32135
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Entry
I6G56_32135 CDS
T08266
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bhg
Burkholderia humptydooensis FDAARGOS_899
Pathway
bhg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bhg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
I6G56_32135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhg03019
]
I6G56_32135
03009 Ribosome biogenesis [BR:
bhg03009
]
I6G56_32135
04131 Membrane trafficking [BR:
bhg04131
]
I6G56_32135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhg04147
]
I6G56_32135
Messenger RNA biogenesis [BR:
bhg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
I6G56_32135
Ribosome biogenesis [BR:
bhg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
I6G56_32135
Membrane trafficking [BR:
bhg04131
]
SNARE
SNARE associated proteins
Others
I6G56_32135
Autophagy
Aggrephagy
Other aggrephagy associated proteins
I6G56_32135
Exosome [BR:
bhg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
I6G56_32135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_22
TIP49
AAA_2
AAA_28
CDC48_2
AAA_33
IstB_IS21
NPHP3_N
nSTAND3
Mg_chelatase
AAA_18
AAA_17
RNA_helicase
ATPase_2
AAA_7
TsaE
NB-ARC
NACHT
ABC_tran
AAA_25
Parvo_NS1
Rad17
AAA_lid_PRS2_C
Sigma54_activat
nSTAND_NTPase5
ORC-CDC6-like
SLFN-g3_helicase
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
QPS46694
UniProt:
A0A7U4SUX4
LinkDB
All DBs
Position
2:complement(2791611..2793752)
Genome browser
AA seq
713 aa
AA seq
DB search
MDKAEQGGLQLRVTEGNARDVGRALARMGPEDLALLDAAVGDLVEVRGKRATVCKAMLAH
KELRAQSRVQLDGVVRGNAGAGIDELVTLKKVAARPANLVQLTPINAAPAPGDLDYIAGL
LDGLPVIEGDRIRATLFGSRCADFKVTSCTPRGPVLIGPNTELSIGRPAKGEPAVVAPSL
SYEDVGGLKPQLMRIREMIELPLRYPEVFERLGVDAPKGVLLYGPPGCGKTLIARAIAHE
CDAAFFSVSGPEVIHKFYGESEAHLRKIFEEAARKAPAIVFLDEVDAIAPKRETVVGEVE
KRVVAQLLALMDGLSGRQQVIVIAATNLPNTLDPALRRPGRFDREIAIPIPDRNGRLEVL
EIHSRGMPLAADVDLDRLADITHGFVGADLEALCKEAAMLCLRRLMSTLDLGLRSISYEQ
LDRLVVNMDDFLSALAEIDPSAIREVFVEVPNVRWEDVGGLGNAKAQLIEALEWPLKYPE
LLTRAGAKPSKGILLVGPPGCGKTWLAKAAANECGVNFIPVKGPELMSKYIGESEKGVRD
VFRKARHAAPCLLFFDEIDALAPRRSEGATGAHVPERLLSQFLAEFDGIEELKGVMVLAA
TNRIDMLDPAVLRPGRFDEIIEIALPDPAARREIFDVHLRRKPLAADVASDRMAEESSGF
SAAEIASVCRRAALSAVRRAVAEDIRDPARLHLSTADLTDAIQEARQRRKQTQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagcggaacagggcgggctccaactgcgcgtgacggaaggcaacgcccgcgac
gtcggccgggcgctcgcgcgcatggggccggaggatctcgcactgctggacgcggcggta
ggcgatctggtcgaagtgcgcggcaagcgtgccaccgtatgcaaggccatgctcgcgcac
aaggaactacgcgcccagtcgagggtgcagttggacggcgtcgtccgcggcaacgccggc
gccggtatcgacgagctcgtcacgctgaaaaaagtggcggcgcgtccggcgaacctggtg
caactgacgcccatcaacgccgcccccgcgccgggcgatctcgactacatcgcgggcctg
ctcgacggcctgccggtgatcgagggcgaccgcatccgcgcgacgctgttcggcagccgc
tgcgcggatttcaaggtgacgagctgcacgccgcgcggaccggtgctgatcggcccgaac
accgagctgtcgatcggacggcccgcgaagggggagcctgcggtggtcgccccgtcgctg
tcgtacgaggatgtcggcggcctcaagccgcaattgatgcgcatccgcgaaatgatcgag
ctgccgctgcgctatcccgaagtcttcgagcggctcggcgtcgacgcgcccaaaggggta
ttgctgtacggcccgccgggttgcggcaagacgctgattgcgcgggccatcgcacacgaa
tgcgacgcggctttcttctcggtgtccggccccgaagtcatccacaagttctacggcgaa
tcggaggcgcatctgcgcaagatcttcgaggaagccgcgcgcaaggcccccgccatcgtt
tttctggacgaagtggatgcgatcgcgcccaagcgcgaaactgtcgtcggcgaagtggaa
aagcgcgtggtcgcgcaactgctagcgttgatggacggattgagcggccgtcagcaggtc
atcgtgatcgccgccaccaatctgcccaacacgctcgatccggcattgcgccggcctggc
cgcttcgatcgcgaaatcgcgattccgatccctgatcgcaacggccgtctcgaggtgctc
gaaatccacagtcgcggcatgccgctcgcggccgacgtcgacctggatcgtctcgccgac
atcacccacggtttcgtcggcgcagatctcgaggcgctgtgcaaagaagcggcaatgctt
tgcctgcgtcgtctcatgtcgacactcgatctcggcctgcgctcgatttcctacgagcag
ctcgatcgcctcgtcgtgaacatggacgatttcctgtccgcgttggccgagatcgatccg
tcggcaatccgcgaggtcttcgtcgaagttcccaacgtgcgctgggaagatgtcggcggc
ctcggcaacgcgaaggcgcagttgatcgaagcgctggaatggccgctcaagtatccggaa
ctgctgactcgtgcgggcgccaagccttccaagggcatcctgctcgtcggcccgcccggt
tgcggcaagacttggctcgcgaaggccgcggccaatgagtgcggcgtcaatttcattcct
gtcaaaggaccggagttgatgtcgaaatacatcggcgaatcggaaaaaggcgtgcgcgac
gtgttccgcaaagcacggcacgcggcgccctgcctgctgtttttcgacgaaatcgatgcg
cttgccccccggcgcagcgaaggcgcaaccggcgcgcatgtgccggagcgtctgttgtcg
cagtttctggccgaattcgacggcatagaggaactaaaaggcgtgatggtactcgccgcc
acgaaccgcatcgatatgctcgatccggccgtgctgcgtcccggccgcttcgacgagatc
attgaaattgcgctgccagacccggctgcgcgccgcgagattttcgacgtgcacctgcgc
cgcaagccgctcgccgccgacgtggccagcgaccggatggcggaggaaagcagcgggttc
tccgccgccgagatcgcctcggtgtgccgccgcgcagcgctgtcggccgtgcggcgcgcg
gtcgccgaggatatccgcgatccggcgcggctgcatctgagcaccgcagacctgaccgat
gcgatccaggaagcaaggcagcggcgcaagcagacccaatga
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