Borrelia hermsii CC1: L283_03180
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Entry
L283_03180 CDS
T03871
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bhi
Borrelia hermsii CC1
Pathway
bhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L283_03180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhi03400
]
L283_03180
Enzymes [BR:
bhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L283_03180
DNA repair and recombination proteins [BR:
bhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L283_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
Viral_helicase1
UvrD_C_2
AAA_22
DEAD
AAA_30
STPPase_N
Motif
Other DBs
NCBI-ProteinID:
AJW73419
LinkDB
All DBs
Position
complement(671671..675111)
Genome browser
AA seq
1146 aa
AA seq
DB search
MKEIIDKIKYNEKILIEASAGTGKTYTLENTITNLLINKMYSPSEILVLTFTKKATEEMH
IRILKSIENAYQNSKTDKSLKTIYEQSNKIFISTINKFALYALNNFQIETENFSKYSVKE
NFTSEIDEIVYEFLRKSDSLKKEFEIKDDEFEIFKSKFKNTKDMTQYIRQGYKRDKTQEL
GDWIETQTIFNQMLTNKDKLIDKYNLIVEALNEMTMEEKRTFLNKHNQGIKISEIKYSHE
KDIVKITDILTNNKFFCKIIESNLKKNVTLLPKELKIQTALRELSHETNTDKEDKSTLRR
FINLKVEYKILKYIERELATTINATNTIDQKQIMLNLKKHLESRDNRLLNSIKNRYKIIL
IDEAQDLDLIQIEIFELLSSCGIKLVFIADPKQIIYTFRNADISFYNQNIKDKIKDDARI
TLLTNYRSNKKLIELLNIMFDNIYNKARTDEIEQIKFTKSKTDPKNDENKIFVNGQEIEA
INIIETEEDKNVLQKTALTIKYLLTNGKIYDNNKLRQIKESDIKVLCRTSKEVDFIDREL
KNQDVKTNKLAESFFKTKEFNLIFYLIKCLDRKQNFQTLNYILTSKIINLPWELYLSLLE
ENGIKHIEEAIIDIIYLLENQEITLIEAIDEIISKKDLWLNLAKNFRNTTFTEFAQSKKS
YREILINEGKFEELKNYETSLDFISKIYYEDKNIESLISTLEDLILNKDIEQDEDKITTG
DNQAIEILTIHKSKGLSINIVFLIGDIQNNDNLLKKSDTFYKFYSKNKIEYDFLKLKENQ
QFAKNKILNEEKNIFYVGTTRARFALFIINQGATINKMLELAEIKTIEKINLNFNVYNLI
KTNQFNKLDINDNKEIKLIPPKPINKYLFRKEHTHSYTSLASIYKSNHHENPETRNDETY
DNDATCSGETLPRGKDIGNILHAIMQDINFSDAKDSFNNFQKINIALIQKKIEHFNSKLN
TPKLQEMLIKMIYNILNTKIRFIGARLCDIQELQKEMEFLIKINTKIYEQKSLFKDHNKL
DLVLNDGYIKGIIDLIFKINNKIYILDYKTNYLGENLKDYNLTNLKKKMKQEQYDLQYKI
YALGIKKILFKNIEEYNKHFGGVIYLFTRAFQKNIKEQSKTQNGIYSTIPNFKELDLEQI
YLQLKY
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaataatagataaaatcaaatacaacgaaaaaatattaattgaggcttcagca
ggaactggaaagacctacacacttgagaatactattacaaacttactcataaacaaaatg
tactctccaagcgagatcttagtgctaacattcacaaaaaaagcaacagaagagatgcat
attagaatattaaaatcaattgagaatgcatatcaaaattcaaaaacagataaatcctta
aaaaccatttatgaacaatcaaataaaatctttatctcaactataaacaaattcgcacta
tatgctctaaacaattttcaaatcgagacagaaaatttttccaaatacagtgtaaaagaa
aattttacatcagaaatagacgaaatagtttatgaatttttaagaaaatcagattcatta
aaaaaagaatttgaaatcaaagacgatgaatttgaaatctttaaatctaaattcaaaaat
acaaaagacatgactcaatatataagacaagggtataaaagagacaagacgcaagaactt
ggagattggatagaaacccaaacgatttttaaccaaatgctcacaaataaggataaatta
attgacaagtacaacttaatagttgaagcattaaacgaaatgactatggaagaaaagcga
actttcctaaataaacataaccaaggaattaaaatatcagaaatcaaatatagtcatgaa
aaagacatcgtaaaaataacagacatacttacaaacaacaaatttttctgcaaaataata
gaatctaatcttaagaaaaatgttactcttctacctaaggaactaaaaatacaaacagct
ttaagagaacttagccatgaaacaaatacagataaagaagataaaagcacacttagaaga
tttattaacctaaaagtcgaatataaaatacttaaatatatagaaagggaacttgcaact
accattaatgcaacaaatacaatagaccaaaaacagataatgctaaacttaaaaaaacac
ttggaatctcgtgataacagactattaaattcaataaaaaacagatataaaataatatta
atagatgaagcacaagatttagatctaatacaaatagaaatatttgaactactcagctct
tgtggtataaaactagtatttatagctgatcctaagcaaataatttatacatttagaaat
gctgatatatcattttacaaccaaaatataaaagataaaataaaggatgatgcaagaata
acattactaacaaattacagatcaaataaaaagttaatcgaacttttaaatattatgttt
gataacatctataataaagcacgcacagatgaaatcgaacaaataaaatttaccaaatca
aaaacagatcctaagaatgacgaaaataaaatttttgtaaatgggcaagaaatagaagca
ataaacataatagaaactgaagaagataaaaatgtcttacaaaaaacagcactaacaata
aaatatttactaacaaacggcaaaatttatgataataataaacttaggcaaattaaagaa
tcagacataaaagtgctttgcaggacaagcaaggaagtagatttcatagacagagaactt
aaaaatcaagatgtaaaaacaaataagctcgcagaatcattttttaagacgaaagaattc
aacttgatattttacctcataaaatgtttagacagaaaacaaaactttcaaactctaaac
tatatcttaaccagcaaaataataaaccttccgtgggaattatacctaagtttacttgaa
gagaatggaataaagcacatagaagaagctattattgacataatatatttacttgagaat
caagaaataacattaatagaggcaatagacgaaatcatatcaaagaaagatttatggctc
aatttggcaaaaaattttcgtaatactaccttcactgaatttgcacaatcaaaaaaaagc
tacagggaaatcctaataaatgagggaaaatttgaagaacttaagaactatgaaacaagc
ctagattttatttctaaaatttactatgaagataaaaacatagaatcattaatatctact
ctagaagacctaatactcaataaagatattgaacaagatgaagacaaaatcactactgga
gataatcaagccatagaaatactgacaatacacaaatcaaaaggactaagtattaatatc
gtattcttaataggtgatattcaaaacaacgataatctccttaaaaaatcggatacattt
tataaattttactcaaaaaacaaaatagaatatgactttttaaaattaaaagaaaatcaa
caatttgcgaaaaataagattttaaatgaagagaaaaacattttttatgtaggaacaaca
cgagccagatttgcactatttattattaatcaaggtgcaacaataaataaaatgttagag
ctagcagaaataaaaacaattgaaaaaataaacctaaactttaatgtatacaatctgatt
aaaactaatcaattcaataaattagacataaatgataacaaagagataaaattaatcccc
ccaaaaccaataaataaatatctatttagaaaagaacatacacatagctatacgagtctt
gcatcaatctataagtccaaccaccatgaaaatccagaaacaagaaatgatgagacttat
gataatgatgctacttgttctggggaaacactcccaaggggcaaagatattggtaatatt
ttacatgccataatgcaagacataaattttagcgacgcaaaagatagtttcaacaatttt
caaaaaatcaatattgctcttatacagaaaaaaatagaacattttaattcaaaactaaat
acacccaagttacaagaaatgctaataaagatgatttataacatattaaatacaaaaatt
agatttattggcgcaagattgtgtgatatccaagaattgcaaaaagaaatggaattttta
atcaaaataaatacaaaaatttatgagcaaaagtctctctttaaggaccacaacaagttg
gatttagtattaaatgacggatacataaagggaattattgatcttatatttaagataaat
aataaaatatatattctagactataaaacaaattatcttggagaaaatttaaaagattat
aacttaacaaacttaaagaagaaaatgaaacaagaacagtatgacttacaatataaaatc
tacgcgcttggaataaaaaaaatactctttaagaatatagaagaatataacaaacatttc
ggaggagtaatatatctatttacaagagcttttcaaaaaaatattaaagaacaatctaaa
acgcaaaatgggatttattccactataccaaattttaaagaattagatttagaacaaata
tatttgcaattaaaatattaa
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