Borrelia hermsii CC1: L283_04230
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Entry
L283_04230 CDS
T03871
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bhi
Borrelia hermsii CC1
Pathway
bhi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L283_04230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhi03400
]
L283_04230
DNA repair and recombination proteins [BR:
bhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L283_04230
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L283_04230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
UvrB
UvrB_inter
ResIII
UVR
DEAD
Cas3-like_C_2
Viral_helicase1
IKKbetaNEMObind
AAA_30
MreB-like_C
Motif
Other DBs
NCBI-ProteinID:
AJW73610
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Position
904149..906113
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AA seq
654 aa
AA seq
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MRFCLKSDYSPAGDQPKAIREIKESILLDNKYQTLKGVTGSGKTFTIANIIRDLERPSLI
ISHNKTLAAQLYREFKDFFPDNAVEYFVSYYDYYQPESYVPSKDLYIEKEATINEDIEIK
RIRTVTSLSRRRDVIVVATVSSIYALGSPEFFKSAAYAFFVGQKISIKEIADIFVKLQYE
RTLMNLEHDKFSIKGDLIEIWPSNEHGDFAYRIYLDFDNIIRINRISPLTKKILGITDEF
TLFAKSYFVIPYENILNALPKIQADLEMQYLYFKESGKLVEAERLRQRVEYDIEMLRETG
SCQGIENYSKYFGDSEMNRPYCLFDFFPKDYLLFIDESHVTLPQFRGMYNGDYSRKLNLV
NFGFRLPSALENRPLKYHEFEALMNQAVFVSATPGLEEREKSSVIVEQIIRPTGLVDPEI
IIRVSDGQMEDLYNEVQKRIALNEKVLITTLTKKMAEDLTDYLLTLDIKARYLHAEFNAI
ERVDIITSLRRSEIDVIVGINLLREGLDIPEVSLVIILDADKVGFLRSTASLIQMIGRAA
RNSNGCVIMYYDQVSSAMQEAIEETNRRRDIQIEYNKKNNIVPKTIIKKVQNILEKELKN
ETVDYNIKRIISDDKLSKKDLIIKLKFKLEEAVSDERFEDAIFLRDKIKELVKG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcgattttgtttaaagtctgattattctcctgctggtgatcaaccaaaagcaataaga
gaaattaaggaatctattctacttgataataaatatcagactttaaagggtgttacaggt
agtggtaaaacttttacaatagctaatattattagagatttagagcgaccttctttgata
attagtcataataaaactttggccgcacaactttatagggaatttaaggacttttttcca
gataatgcagttgagtatttcgtttcttattatgattattatcagcctgaatcttatgtc
ccatcaaaagatttatatatagaaaaggaagccactattaatgaggatattgaaataaag
aggataaggacagttacatctctttctagaagacgagatgttattgttgttgctacagtt
tcttcaatttatgcactaggttccccagaattttttaagagtgctgcttatgcttttttt
gtagggcaaaagatttctattaaggagatagcagatatttttgttaagcttcagtatgag
agaactcttatgaatcttgaacatgataagttttctattaaaggtgatctcattgagata
tggcctagtaatgagcatggtgattttgcatatagaatttatttggattttgataatatt
attaggataaacagaattagtccacttacaaaaaagattttaggaattactgatgaattt
actctttttgctaagtcttattttgttattccttatgaaaacatattgaatgctcttcct
aaaatacaggcggatttagaaatgcaatatctttattttaaggaaagtggtaagcttgtt
gaggctgagagacttaggcaaagagtggaatatgatattgaaatgttaagagaaactggg
tcttgtcagggtatagagaattattctaaatactttggtgatagtgaaatgaatagaccc
tattgtctttttgatttttttcctaaggattatttgctctttattgatgaatctcatgtt
actttgcctcagtttagaggaatgtataatggcgattattcaagaaaattaaatcttgta
aattttggatttagacttccatcagcacttgagaatagaccccttaaatatcatgagttt
gaagctttaatgaatcaggctgtttttgtttcagcaactcctggtcttgaagagcgtgaa
aagagcagtgttattgttgagcagataatacgtccaacaggtcttgttgatccagaaatt
attattagagtttcagacgggcagatggaagatctttataatgaagttcaaaaaagaata
gctttaaatgaaaaggttttaattacaactctgactaaaaaaatggctgaggatttaaca
gattatttacttactcttgatataaaggctagatatttgcatgcagagtttaatgctatt
gagagagtagatattattacatctcttagaagatcagaaatcgatgttattgtgggaatt
aatttgttaagggaaggtttagatatccctgaggtttctcttgttattatactagatgct
gacaaggtaggatttttaagatcgaccgcttcgctgattcaaatgattggtagagctgct
agaaactcaaatgggtgtgttataatgtactatgatcaagtaagttctgcaatgcaagaa
gctattgaggaaaccaatagaagacgggatattcagattgaatacaataaaaaaaataat
attgttccaaaaactattattaaaaaagtacaaaatattttagaaaaagaattaaaaaat
gaaactgttgattataacattaaaagaattatttccgatgacaaattatctaaaaaggat
cttatcattaagcttaagtttaaacttgaagaagcagttagtgatgagagatttgaggat
gctatctttttacgagataaaataaaagaacttgtaaagggatga
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