Benincasa hispida (wax gourd): 120067138
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Entry
120067138 CDS
T07258
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120067138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120067138
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
120067138
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
120067138
NCBI-ProteinID:
XP_038874505
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Position
12:73815541..73819437
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AA seq
647 aa
AA seq
DB search
MIMMEERGEGAKVRVLIEKATNSTDSEVHPRLLKAIKSVVRNSDPELRVAAQTLMDLMKR
DHSQVRYLTLLVIDELFMRSKLFRSLVVEKLDQLLTLSVGFRRNMLLPEPAAVASILRSK
AIEFLEKWNDSFGIYHRKLRLGYDYLRNTLRLQFPNIQANAMRLQQERMERERRSKEILL
GKFEMLKGNFSSIKEEIQSTLDEIKECLDIVHSKEDTIAMIPLDDGTTEEFRSVELRQIR
LDALKEGETVHENHDNKVIFDALRELYKLMSKHLVSIQEWTSVLVRVDSTDIRFRDSALR
EFIDIRNSLRAVKKRCEELGSNFAESANHDDEDEDFWEEGPVGVMENGGSRKNEDLVVAP
TSNVIKNADTKTSREAHVGNAVPNGEVCSSNPSSLRNKLLADAPVIEWGSFLNTWDSKTE
ILANQRGLELESHWGRVDYDATIPAEKIAELNVRATLYKEDQPEIQPCRAPLRKGGLCPR
RDLKVCPFHGPIVPRDDEGRPLNVSSSLDETTPDLDIGSVEKLARQAVKNVRARDKEAAE
KRERDKKTLKRAKLAKIREHNEVVLRDAALASTSRSSALGEHMETTSEGTGSARNEKKTL
ASMLRKKASTKDRLSQRLLGARSRALTKRELTLNEEANYREAFPNQW
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgatggaagagcgaggagagggagctaaggttagggttttgatcgagaaggct
acgaactccacggattcggaggtccatcctcggcttctcaaggctatcaaatcggttgtt
cggaattccgatccagagcttcgagtcgccgcccaaactcttatggaccttatgaagcgc
gaccattctcaggtccgctatcttacacttctggtaattgatgaacttttcatgagatca
aagcttttcagatctcttgtcgttgagaaattagatcaactgttgacattaagtgttgga
ttcagaagaaatatgctacttcctgaaccagcagctgtggcatctattttgcgttcaaag
gcaatagagtttttggagaagtggaacgattcttttggtatttaccacagaaagcttaga
ttaggttatgactacctgaggaacactcttcgactccagtttccaaatatacaagcaaat
gcaatgcggctacagcaagagaggatggaaagagaaagaaggtcaaaagagatactgctt
ggcaagtttgaaatgttgaaagggaatttttcttctatcaaggaagaaattcagtcgact
ttagacgagatcaaggagtgtttggatattgttcattctaaagaggataccattgccatg
attcctttggacgatggcactacggaagagtttcgatctgttgagctgagacagatccgt
cttgatgcactgaaagaaggagaaacggttcatgagaatcatgataataaagtgattttt
gatgcattaagggagctttataagctcatgtcaaaacatctggtttccatccaagagtgg
acctctgttcttgttagggttgactcaacggacataagattcagggattcagccttaagg
gagttcatcgatatacgaaatagtctacgtgcagtgaagaagagatgtgaagaattgggt
tctaactttgcagaaagtgcaaaccatgatgacgaagacgaagatttctgggaagaaggt
ccggtcggagtaatggagaatggaggttcaaggaaaaatgaagatcttgttgtcgcgccc
acatccaatgtgattaaaaatgcagacactaaaaccagtagagaggcacatgttggcaat
gcggtgccaaatggtgaagtttgtagtagtaatccatcctccttgaggaacaagctctta
gctgatgctccagttattgaatgggggtctttcttaaatacttgggattcaaagacggag
attctagctaaccagcgaggattagagcttgaaagccactggggtcgagtagactacgat
gcaactattcctgccgagaaaattgcagaactgaatgtccgggctacactttacaaggaa
gatcaacccgaaattcaaccatgtcgtgctcctttaaggaaaggaggactttgtccgaga
agggatctaaaagtgtgcccatttcatggacctattgtgccacgtgatgatgaaggacga
cctttgaatgtgagctcttcattggatgaaacaactcctgatctggatattggatctgtt
gaaaagctagcgagacaggctgtgaaaaatgtacgtgcccgagataaagaggcagcagag
aagagagaacgtgacaaaaaaacactgaaacgagccaaacttgcaaaaattagagagcac
aatgaagttgttttgcgcgacgctgcattggcatcgacgtcaagatcttctgctctgggc
gaacatatggaaacaaccagtgaagggaccggatcagctcggaatgagaagaaaacactt
gcgtcgatgctgcgtaagaaagcatcgacgaaagataggttatcacagagactgttgggt
gcaaggtccagggctttaactaagagggagcttacactgaatgaagaggcaaactataga
gaagcatttccaaatcagtggtaa
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