Benincasa hispida (wax gourd): 120067252
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Entry
120067252 CDS
T07258
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120067252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120067252
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120067252
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ATG17_like
DUF6306
HK_sensor_dom_bact
ACBP4_C
TMPIT
COG3_N
Motif
Other DBs
NCBI-GeneID:
120067252
NCBI-ProteinID:
XP_038874708
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All DBs
Position
12:complement(67365066..67386150)
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AA seq
713 aa
AA seq
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MSGSGSGSSSSQWSSSSSPFSSSTGFSFGSTSAFSFGSSSTPLSLSSSSSSNPTSSSSPF
SNQTPNPASSSSSGFGSSSFPSSASSPFSFSLPLFGSAPSSGTSSAPLFGSASSSGSSPA
PSFGPASSSGSSLVPSFGALPSSGSSSAPLFGATPSAGASAPSLFGGVSSATTSSAPLFG
TTSASTASPGSALFGASVAASGSSSSLFGTSTTSGSSGSALFGSSPFGASSSLSTSNLFA
SSSSSTSTSPFQNSFSSSSSQNLNSSSLFAASSSSSSSGFSFSTVSLSKTTSITTASSSS
SLTTASTSSSSFSFGTPASSASQSSFGFSISNAASTGGSSAPSTTATKPTSLSLSSSVAP
LFSTVTTTSGSTPAANSTTQPSFSVPAFSSSSSAATTLSIAASSVPSASSSGAVSSFTGF
GVTSMASSSSAIGSLSLPTKTSTAASSSQAPASFGFPSLTSAPTPATTTSGFSASSQSQT
SSTLVVASSSSGTTSTVNATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANA
IAEWDRRIMQNRDILLRLEIEVAKVVESQAELEKKLELIETHQQEVDKALQSVEEDAERI
YKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMT
PLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttccggttctggatcttcctcctcccagtggtcttcttcttcttctccattc
tcctcttccacaggtttctcattcggatccacttccgccttctccttcggatcatcatca
acccctttatctctttcatcttcctcctcctctaaccctacctcctcctcctctccattt
tccaatcaaacccccaatcctgcttcttcctcttcctccggctttggctcttcctctttc
ccctcctccgcttcctctcccttctctttctccctccccttgtttgggtctgctccctcc
tctgggacctcatctgctcccttgtttgggtctgcttcctcctctgggagctcacctgcg
ccctcgtttgggcctgcttcttcctctgggagctcccttgtgccctcgtttggggctctt
ccgtcctccgggagctcatctgcgcccttgtttggggctaccccatctgcaggggcctcc
gctccgtccttgtttggaggggtgtcttctgcaactacttccagtgcaccattgtttggc
acaacatctgcatccactgcaagtccggggtcagcgttgtttggcgcttctgttgccgct
tcaggttctagttcttccctgtttgggacatctacaacttcagggagttcaggttcagct
ttgtttgggtctagtccctttggtgcatcttcttcgctttccacttcaaacttgtttgcg
tcgtcttcatcgtctacatcgacttctccgttccagaactctttttcttcgagttcttcc
cagaatttgaattcgtcttcactgtttgcggcttcttcttcttcttcttcttctgggttt
tcattttccaccgtgtctttgtccaaaactactagtattacaactgcatcttcttcttct
tctcttacaacagcctctactagttcctcgagcttctcattcggaacacctgcttcgtcg
gcatctcaatcttctttcgggtttagtattagcaatgcagcatcgacgggagggtcttct
gctccgagcactacagctacaaagcctacttctctatcattgtcaagttctgtggctcct
ttattctctacggttactaccaccagtggttctactccagctgcaaatagcacaactcag
ccatccttctccgtgccagcttttagttcgagttcttcagctgctaccaccttgtccata
gcagcatcctccgttccttcggcttcttcttcgggtgctgtgagttcatttactggtttc
ggtgtcacaagcatggcttcttcatcaagtgcaattggttccttatcattgccgaccaaa
acatcaactgctgcttcatcatcccaagcaccagcctctttcggtttcccttctctgact
tccgctcctactcctgctaccaccacgtctggtttcagtgcttcaagtcagagtcagact
tcatcaactcttgttgtagcaagcagtagtagtggtacaacttcaactgttaatgcaaca
gtatcttctacaccaaaattaccatctgagataacagggaagactgtcgaagagatcata
aaggaatggaatgcagagcttcaagagcgtactggaaagtttcggaagcaggccaatgct
attgctgagtgggataggaggattatgcaaaatcgtgatattctccttagacttgagatt
gaagttgcaaaggtggttgagagccaagctgagttagagaagaaattggagctgatcgaa
actcaccaacaggaggttgataaggcattacaaagcgtggaagaagatgctgagcgcatt
tacaaggatgaacgtggtttacttcttgacgatgaagctgcatctacgagggatgcaatg
tatgagcaagctgaatatatagagcgggaactagagcagatgacagaacaaatcaaatca
attatccagacgctaaatgcaaaccagggaggagaacttgatgtgattgatgggatgacg
ccgttagatgcagttgtccgaattttaaacaatcaattaagttcgttaatgtggatcgat
gaaaaggccgaagagttttcttcacgtattcagaagcttgctgctacggagggtcctgct
gcagatcgtgaattgttgggtcaaaagttctggatgtcttaa
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