Benincasa hispida (wax gourd): 120067742
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Entry
120067742 CDS
T07258
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03015
mRNA surveillance pathway
bhj04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120067742
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120067742
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bhj01009
]
120067742
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120067742
03036 Chromosome and associated proteins [BR:
bhj03036
]
120067742
Protein phosphatases and associated proteins [BR:
bhj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120067742
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120067742
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120067742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
120067742
NCBI-ProteinID:
XP_038875233
LinkDB
All DBs
Position
12:complement(52065538..52071555)
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AA seq
539 aa
AA seq
DB search
MDMDAEGNLEFLLDLEMLQLPEVSYFALKSNPYVVEALFSQWLSLPETGRLVNSLVADAK
SGASLSVGGNSTGINGVSNHSLPSMFPGGSTPPLSPRSASSSPRTVKQRFGPSSLGSPLK
LVKEPAREAIPQFYFTSGRPPPNAMTEDFLSKANQFFLSRLDGVQIKEFKSVTKEICKLP
SYLSTALFRKIDVNCNGKVSREQFINYWITSNMLTMDLASQIFTILKEPERNYLVQDDFK
PALQELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSSNGRITLRELKRGNLIAAM
QHVDKEEDINKVLKYFSYEHFYVIYCKFWELDNDHDFLIEKENVIKYSNHALTYRIVDRI
FSQIPRKFTCNVEGRMGYEDFVYFILAEEDKSSEPSLEYWFKCIDLDGNGVLTRNEMQYF
FEEQLHRMECMAQEPVLFEDILCQIFDMIGPENEECITLRDIKNCKLAGHVFNILFNLNK
FVAFESRDPFLIRQEHEDPTLTEWDRFAHREYIRLSMEEEAEDASNASDVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatatggatgctgaaggtaacttggagttcctgctggaccttgagatgttgcagctc
cccgaggtgtcttattttgctctgaaatccaatccttatgtcgttgaagcgctgttttcg
cagtggctttcgcttcccgagactggccgactggtgaattctttggttgctgatgcgaag
tccggtgcttctttgagtgttggcggcaactctactggaatcaatggtgtttctaatcat
tctttaccttccatgtttccgggtggcagtactcctccactttcaccacgcagtgcatcc
agttcaccacgtacggtgaaacagaggtttggcccttcttcgttaggttctccccttaag
ttggttaaggaaccagcaagagaggctataccacagttctattttacaagtggccgtcca
ccgcctaatgctatgacagaagattttctgtctaaagcaaatcagttttttctatctcgc
ttggacggagtgcaaataaaggaatttaaatcagtcacaaaggagatctgcaagttaccc
tcatatctctccactgctctttttaggaagattgacgttaactgcaatggaaaagtatca
agagaacagttcatcaattattggattacaagcaatatgttaactatggatttagcatcc
caaatatttactattctcaaggaaccagagcgcaattaccttgttcaggatgatttcaaa
cctgctttacaagaacttttggcaactcacccagggttggagtttttgcaaagtacacca
gaattccaggaaagatatgctgaaacagtcatatacaggatattttactatattaacaga
tccagtaacggtcgtattaccctcagggagttgaagcgtgggaacttaattgctgcaatg
cagcatgtggacaaggaagaagatatcaacaaagtcctgaagtacttctcatatgaacac
ttctatgtgatatattgcaaattttgggagcttgacaatgatcatgattttttaattgag
aaagagaatgttatcaaatatagtaaccatgctctaacctatcggattgtcgatagaatc
ttttctcagattccaagaaaatttacttgtaacgttgaaggaaggatgggatatgaagac
tttgtttacttcattctggctgaagaggataaatcatctgaaccgagtcttgagtactgg
ttcaaatgcattgatctagacggaaatggagtgctcacaaggaacgaaatgcagtatttt
tttgaagagcagttacaccgaatggagtgtatggctcaggaaccagtgctgtttgaggac
atattgtgccagatttttgatatgattggacccgagaatgaggaatgcataacattacga
gatatcaaaaactgtaaacttgctggacacgttttcaacatcctcttcaatctcaataag
ttcgttgcctttgaaagtcgtgatccatttctaattcgtcaggaacatgaggatccaact
ttgactgaatgggatcgatttgcacatagagaatatattcgtctttccatggaagaagaa
gctgaagatgcttcaaatgcaagtgatgtctgggatgagtcacttgaggctcctttttga
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