Benincasa hispida (wax gourd): 120067943
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Entry
120067943 CDS
T07258
Name
(RefSeq) tRNA pseudouridine synthase A 1 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhj03016
]
120067943
Enzymes [BR:
bhj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
120067943
Transfer RNA biogenesis [BR:
bhj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120067943
Prokaryotic type
120067943
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
120067943
NCBI-ProteinID:
XP_038875516
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All DBs
Position
12:62794991..62798310
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AA seq
334 aa
AA seq
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MRCWAVGSPVLPPISLPLSPAIPFPNGASSSSSRGSPNAEDSSCIIAPPFPSFKWRLLIA
YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT
PFNYDSLESVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR
CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIDMGPLVQ
LEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASQDRRELAKYASGVPPQGLCLV
SINYKEDHLKLPSDCPGTSVGRNRSVSKCKLPFY
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgctgggcggtgggttcgcctgttcttcctcccatttcccttcccctttcacca
gccattccatttccaaatggcgcttcatcttcctccagtcgtggatccccgaatgcggag
gattcctcttgtatcatagcaccccctttccccagcttcaaatggcggctgctcatcgct
tatgacggtactcgatacgcaggctggcaatatcagaggtcaccacccactatccagtgc
ctcattgaagaagccttgattggagcaacaaagcttgaaaggaaggatctccatttagtt
ggtgcaagcagaaccgataaaggagttcatgcctggggtcaggtggctcactttattacg
ccatttaactacgatagcttggaaagcgtccatgctgcactgaatggtcttcttcccgtg
gatataagagttcgagagatcagtcctgctgcacctgactttcatgctcggttttctaca
ttaagcaaggtttatcactacaagatatataatggcgcgatcttggatccatttcagcgt
tgctacacttaccattgtgtttataaactcaactatgcagccatgaaagaagctgcaaat
tatttcgttgggaagcatgatttttctgcttttacaaatgcagcgcataatgatcgagtg
gtaaatccagtgaaggtcatttttcgttttgatgtcatagatatgggacctcttgtgcag
ctagaagttgagggttctgggttcttgtatagacaagttcggaatatggttggcttgttg
gttcaaattggaaaggaagcaattcctcctgatgttgttcctaagattttggcttctcaa
gatcgcagggagcttgcgaagtatgcttcgggcgttcctcctcaggggctgtgtcttgtg
agtattaattataaagaggaccatttaaagcttccatctgattgccctgggactagtgtt
ggtaggaatcgtagtgtgagcaaatgtaaactccctttttattga
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