Benincasa hispida (wax gourd): 120068006
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Entry
120068006 CDS
T07258
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120068006
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120068006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
120068006
NCBI-ProteinID:
XP_038875594
LinkDB
All DBs
Position
12:28047269..28102297
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AA seq
1611 aa
AA seq
DB search
MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKPEDSAREPPNKAQKRVL
AINRELPPRNEQFLLDFEQIQNQFADHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR
SLCSIGYINWDTFLPSLLSSVSSAEVSVGQGSQAASTVSTTNLSQSGVLPSSNPVPNSST
FQSSNPASPSPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAI
SSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAM
HMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQ
RGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATID
RIFELLKLTNSEIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGHHVLRTNH
VTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKSADPNNPQSILLDFISSCQNL
RLWSLNTTTREYLNSEQLQKGKQIDEWWRLASKGDGMVDYMNMDDRSIGMFWVVSYTMAQ
PACETVMNWLTSAGVPELSSAQNLQTNERIMVMREVSPLPMSLLSGFSMNLCSKLAYQME
ESLFSGQAVPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNY
RLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREG
KGPTEFTETLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFP
PVLREVLIGRIDKRGVAIQAWQQAETTVINQCNQLLSTSADPTYVMTYISHSFPQHKQYL
CAGAWILMQGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDI
LPKVCANLSFFVWNQELLPLDILLLAFIDRDDDPNALRIVISLLDRQELQQRVKLYCISR
GSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDIAARLLPVIPLIVYRLIENDIVD
QADRMLALYSPFLAYHPLRFTFVRDILAYFYSHLPNKLIVRILNVLDISKIPFSESFPQH
ISSVGSVGSVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTASDTSNNSMRPSHNKAPGTT
PPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQPTL
IQSSNNLHGTPSSMGQGSALPTSPSGGSTDSLNGRSNTSVSGINTPNFVSRSGYTCQQLS
SLMIQACGLLLAQLPQEFHGQLYLEASRIIKETWWLSDATRSLGELNSAVGYSLMDPTWA
AQDNTSMAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPK
LANAHSLFCKTLSSLLSVMVDVFGKNSQTSILVEAAEIADLIDFLHHVVHYEGQGGPVVA
NSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYAATHPKLVQNPA
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcacagcgatcctcatcactaacagcagtctcgacttcccgcgcttaccag
ttccacccagctcgagctgccattgtcaatctcttcgacctctacttaggaaggagtaat
cgtctaaagcctgaagattcagctcgagaacctccgaacaaggcccaaaagcgtgtacta
gctattaacagagagcttcctcctcgaaatgagcagttccttttagattttgagcaaatt
cagaatcaatttgcagaccatgatcaattgcgtgctgtgactgagtcagttctcatctcc
ctagttgtgcagtgcagtgggcatgtaccaagagcagaatttcttctatttgctttgcgg
agtttatgcagtataggttacatcaattgggacacttttctgccatcccttctttcttca
gtctcatctgcagaagtttccgtgggtcagggaagtcaagctgcctctactgtctcaaca
accaatttatcgcagtctggggtgcttccatcctcaaacccagtgcccaatagttctact
tttcagtcttccaatcctgcttctccgtcaccatcagttcatggaatcagttcacctgct
caatctagtatcgatccatcttcttgcacagcattatcaccaatcaaatcctctgatctt
tctgggactggattaccatctgcagttagggtcaattcatttttgagaaataatgcaata
agcagtctacgtcaactttgttgcaagattatcttaagtggtcttaaatttgatttgaaa
ccagtgacacatgctgatattttttcccacatgctcaattggatggttaattgggaccaa
cggcaacaagggatggaggaatctgagaatatgaaatcctggaggcctgacaaggctctc
attgaatggctacatagctgtttggatgtggtctggcttttagttgaggagaataaatgt
cgggtgcccttctatgaattactacgcagtggtttgcaattcatagataacattcctgat
gacgaagccttattcacactcatcttggagatccataggaggcgagatatgatggcaatg
cacatgcagatgttggatcaacaccttcacagccctacatttgggactcaacggattttt
tctcaaacaatgcagaacatatctggtgaagcagtagcaagcttgcgctattcaccaatc
acatatccaagtgtacttggtgaacctcttcatggagaggatattgcatctgctattcag
agaggaactcgagattgggaaagagctatgcgttgtataaggcatgctcttcgcacaact
ccatcaccagactggtggaagcgtgtgcttctagtggctcctggatataggtctcctgca
caaggactcagtcctggtgctgtttttacatctgagatgatatgtgaggcgacaattgat
agaatatttgagctattgaagttgacaaattcagagatacattgctggcaagagtggctt
gttttctcagatatattcttttttcttatgaaaagtggatgtattgattttgcggacttt
gtggctaagctgttctctcgtgtaacagagggaggtcaccatgttttaaggacaaatcat
gtcacttggctgtttgcacaaatcattcgggttgaacttgtgatgagtgctttgaattca
gatgcaaggaaggtggagacgacaagaaaaataatatcatttcatagagaagataaaagt
gctgatccaaataatcctcaaagcatcttgcttgattttattagtagttgtcagaacttg
cgtctttggtcactaaacacaacaacaagagaatatttaaatagtgagcagctacagaaa
ggaaaacaaattgatgaatggtggaggctagcaagtaaaggtgatggaatggtggattat
atgaatatggatgacagatcaattgggatgttttgggttgtctcatacaccatggcgcaa
ccagcatgtgaaactgtgatgaattggttaacttctgcaggagttccagaactatcatca
gcacaaaatttacagacaaatgagaggataatggttatgcgagaagtgagcccattacca
atgtctttgttatcaggtttttcaatgaacttgtgctcgaagctggcatatcaaatggaa
gaatctttattttctggacaggctgttcccagtattgcattggctgaaacatatactagg
ttgcttctccttgcaccacactcattgtttcgttcacattttaatcatttagcacaaaga
aacccatccctattgagcaaaccaggagttacgcttctagtgcttgaaattctgaactat
cggttgcttcccctttacaggtaccaaggcaagagtaaggctttgatgtatgatgtgaca
aaaataatttctgcacttaaaggaaagcgtggagaccatcgagtatttagattggctgaa
aacttgtgcatgaatctcattttttcattgagagattttttctttgtaaaaagggaaggg
aagggtccgactgaatttacagagacactaaatcgattagctgtggtcactcttgctatc
ctcattaaaacacggggaatagctgatgccgatcacttgctttatcttcaaacaatgcta
gagcagacaatggccaccagccaacatacttggtcagaaaaaactctgcgatacttccca
cctgttcttcgtgaagtgttgattggaagaatagataaaagaggtgtagctattcaagca
tggcaacaggcagaaaccactgtgatcaaccaatgcaaccaacttctttccacatcagct
gatccgacgtatgtgatgacctacatcagtcatagttttccgcagcataaacaatatcta
tgtgctggtgcatggatacttatgcaagggcaccctgaaaatattaactgcacaaccttg
gctcgggtattgagagaattttcaccggaagaagtaacagctaatatttacacaatggta
gatgtgctgcttcatcacattcagattgaacctcagcatggacattccacacaggatatt
ttgcctaaagtttgtgccaatctttcattttttgtatggaatcaagaattacttcctctt
gatattctgctcctagctttcattgaccgtgatgatgatcccaatgctctacgcatagtg
attagtctacttgataggcaagagcttcaacaacgagtcaaactatattgtatcagccgg
ggttctcctgagcactggcttcactctgtagtgttcaaaagaaatgatttacaaaaggct
cttgggaatcatctttcatggaaggacaggtacccggtattttttgatgatattgcagct
cgattacttccagtcattccattgattgtttataggctcattgaaaatgatattgtagat
caagctgatagaatgctggccttgtattctccatttttggcctaccaccctcttagattt
acatttgttcgtgatatactcgcatacttctatagtcatctacctaacaagctcattgtt
cggattttgaatgtacttgatatcagcaagattccattttctgagtcattcccacaacac
attagttctgttggttctgtcggttctgtcatgtgcccaccaatggattactttgctacc
ctcttgttggggctagtcaataatgttataccttccttacagacatcaaaatctggaacg
gcaagtgatacttcgaataattcaatgcgtccatcgcataacaaagcccctgggacaacc
ccaccgggggcaaccagtgctcccgagagccaaaaagcattttatcaaattcaggaccct
ggcacatatactcaactcgttcttgaaacagcagtcatagaattactctctctccctgtc
tcagctggtcagattgtgtcatcgctggttcaaattgttgtcaacatacaacctactcta
attcaatcgagcaacaatttgcatggaactccgagcagtatgggtcagggatcagcatta
ccgacatctccatctggaggaagcacagactccttgaatggaagatcaaatacctcagta
tctggaataaatactccaaactttgtttcacgaagtgggtatacgtgccaacaactttct
agcctaatgatccaagcatgtggcctactactagcgcagcttcctcaagaatttcatgga
caactgtatctagaggcatcacgcattataaaagaaacttggtggttgtctgatgcaacg
agatccttaggagaactaaattctgctgttggttattcattgatggatccaacatgggca
gcacaagacaatacctcaatggctattggtaacacggttgcacttcttcactctttattc
agtaacctcccacaggaatggctagaaggggcccatgtgattatcaaacatctcagaccc
gtcacgtcagtagcaatgctgagaatagttttccgtattatgggtccactgctccccaaa
cttgccaatgctcatagcttattttgtaagactctctcctcacttttgagtgtaatggtg
gatgtatttgggaagaactcacaaacatcaatactagtagaagctgcagaaatagcagac
ctcattgactttctccatcatgttgttcattatgaagggcagggagggcctgtggtagct
aacagcaagcctcgacaagaagttttggccattataggaagagctttggaaaatctgcgt
ccagacgtgcaacacctcctttcccacttgaagcctgacactagttcttctatctatgca
gcaacacatccgaagttggttcaaaatccagcttga
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