Benincasa hispida (wax gourd): 120068363
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Entry
120068363 CDS
T07258
Name
(RefSeq) uncharacterized protein LOC120068363
KO
K19022
AP-5 complex subunit beta-1
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120068363
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
120068363
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
120068363
NCBI-ProteinID:
XP_038876028
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Position
12:31129578..31135692
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AA seq
1132 aa
AA seq
DB search
MTDHTSDDTKPSLKSLPLQDWESLIEDFHSGGPRLHRWTSQFSITVSSLLDLVLSSILKR
DFPLNLKLQLLHFIDEFVSFSDSSDSVLSESVLERLIDTLRVVLQSPTSDGLHFTFSLKE
QIMVSTTSIFISLDALRNFDVRLLESLTELLLTVVNRPNHGIDRQARAIACECLRELEKA
YPCLLSHVVGHLWSLCQSERTHSSQSYILLFTTVISSIVAQKSSVSILSTSIPLVPFNVP
HSVLAPDSISNREVSPVLNSKELRRAIAFLLESPQILTPPAMVEFMTMIMPVAIALELQA
SMLKVQFFGMIYSFDPLLCHVVLMMYLHFLDAFDEQEGEIARRLLLISKETQQHLVFRML
ALHWLLGLFRIDSPLGKKTISFAEMGLSFYPAVFDPLALKALKLDLLALTSIRSTMHKAE
TVSGEDSESGKSVVKLLQDGLVCVSAFKWLPSGSTETAVAFRAFHKFLIGSSSHSVSDSN
TNKSLVDFNVFHMLQEMLVELILEGQRLVPVIVVFTDRLLGCQKHRWLGESLLQKFDEHL
LPKVAINYKLVSCFSVFNRMAENDTIPPSGLLGLFVKFMLFLVEKHGPDTGLKSWSLGSK
VLGICRTLLMHHQSSRLFLKMSRLLAFTCLYFPDLEVRDNARIYLRMLTCVPGKKLRDLL
KLGDQPFGVSQTLHSGTLYNVQSPRLSHDLKKCRNISSYIHLKRKIPLLVKHSWSLSLST
LGVENDKSGFPEGIMDTETVVEERVTEFSSNIEKINLPQEPLRVMDSKISKILEILRRHF
SCIPDFRHMPGLKVTIFCSLSFDSESFNRIWGGGTFAKNLDDMDNHPAMYATVLKFSSSA
SFGPIPARHIPFILGESPGDEGSPSSRGVSSLDIVPIQNGYGKDERFKALVAVELEPREP
TPGLVDVSIEATAGSGQIIRGPLQSITVGLEDLFLKAVVPSDISMDEIPGYYSDLFNALW
EACGTSSNTGRETFSLKGGKGVAAISGTRSVKLLEVSAASLIEAAEHYLAPFIVSVVGEQ
LIQIVKDRNIIKNVIWEDMASENFSQVTSAVPDLDRGPLRLTYFSNEDEMGSLVSSYKRN
MGHFHILIFLPPRFHLLFQMEVSDFSTLVRIRTDHWPCLAYIDDYLEALFLA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcatacttccgacgataccaagccgtcattgaagtcccttccattacaagat
tgggaatccctcatcgaggacttccacagcggcggccctcgtcttcaccgatggacttct
caattttccatcaccgtttcttctcttctggacttggttctgtcatccatcctcaagcgg
gatttccctctcaatctcaagcttcagctcctccatttcatcgatgagtttgtttccttt
tccgattcttccgattctgttttgtctgaatccgtacttgagcgtttgattgataccctt
cgtgtggttttacaatctccaacttctgatggtcttcattttaccttctctctcaaggag
caaattatggtttccaccacctccattttcatttccctcgatgctttgcgtaatttcgat
gttcgattgcttgagagcttgactgaattgctgcttactgttgtcaatcgccccaatcat
gggattgataggcaggctcgggcaattgcgtgcgaatgcttgagggaattggagaaagct
tacccttgtttactgtctcatgttgtgggacatctatggagcttgtgccaaagcgagcgc
acgcactcatcccagagctatattttacttttcacaaccgtcatcagtagtattgttgcc
caaaaatcaagtgtctcgatcctcagcacgtccattcctttggttcctttcaatgttcca
cattctgttcttgctccagattcgatctcgaatcgagaggtttctcctgtactgaattct
aaagaattgaggagggcaatagcgttcttgcttgaatcaccacaaattctaactccgcct
gctatggtggaattcatgactatgataatgcctgtagctatagctttggagttgcaggcg
tcaatgttgaaggtgcaattctttggaatgatatattcctttgacccattgctgtgccat
gttgttttgatgatgtatttgcattttttagatgcatttgatgagcaagaaggcgagatc
gctcgccgacttttgttgatttctaaagaaacacagcaacatctggttttccgtatgctt
gcactccattggttgttgggtttattcaggattgatagtccacttggaaaaaagacgatt
tcgtttgctgaaatgggtttgagcttctatcctgcggtgtttgatccgcttgctcttaaa
gctttgaagctcgaccttcttgccttgacctcaatacgtagtacaatgcacaaagcagag
actgtttcaggggaagattcagaatcagggaagtcagtggtgaagcttcttcaagatggt
ctggtatgcgtatcagctttcaaatggttaccttcaggaagcacagaaactgctgttgct
tttcgtgccttccataaattcttgatcgggtcttcatctcattctgtctctgactcgaac
accaacaaaagtcttgtggacttcaacgtcttccatatgttgcaggagatgcttgtggag
ttaatattggaaggtcagagattggttcccgttattgttgttttcactgaccgcttgtta
gggtgtcaaaagcacagatggttaggggagagcctgctccaaaaatttgacgagcatttg
cttcctaaagttgcaatcaactacaaattagtatcttgtttctcagtattcaatagaatg
gctgaaaatgatacaatacctcccagtggattgttaggactttttgtcaagttcatgttg
tttcttgttgagaaacatggaccagatacagggctgaagtcttggtctcttggaagtaag
gtacttggcatttgccggacattgttgatgcatcaccaaagctctcgattgtttcttaaa
atgtctcgtctgcttgcatttacttgcctatattttcctgacttggaagttcgtgataat
gcaaggatctacctgcgtatgctgacttgtgtacctggaaagaagcttagggacttgcta
aagcttggagatcaacccttcggcgtttcacaaactcttcattctggcactttatacaat
gtccaatctccacgactttctcatgatctcaagaagtgcagaaacatctcatcctatata
catctaaaacgaaaaattccattacttgtaaaacattcttggtccttatctctatcaact
ctaggagttgaaaatgataagtctggttttccagagggtatcatggacactgaaactgtg
gttgaagaaagggtgaccgaattctcttctaacattgaaaaaattaatctacctcaggag
cctttgcgtgtgatggactctaagatttccaagattttggagatactacggagacatttt
tcatgcattcctgacttcagacatatgccagggcttaaagttacaatattttgtagttta
agttttgattcggagtcatttaatcgcatttggggaggtggtacatttgctaagaatctg
gatgatatggataaccatcctgcaatgtacgcaaccgtgctcaagttttcttcttctgca
tcatttggtcccattccagcccgtcatataccttttattttgggggagtctcctggggat
gaaggttctcctagttcaaggggggtctcctcattggacattgttcctatccagaatggt
tatgggaaagatgaaagatttaaggctctggtagcagttgaattggaaccaagggagcca
acaccaggacttgttgatgtctcaattgaagctacagcaggaagtggccagatcattcgt
ggtccgcttcagagtatcacggttggacttgaagatttgtttcttaaagctgttgtcccg
tccgacatctcaatggatgaaatccctggttattattcagatttattcaatgctctatgg
gaggcgtgtgggacgtcttccaatactgggcgggagacattttcactgaaaggaggcaaa
ggagttgcagctattagtggaaccagatcagttaaactacttgaagtctcagcggcttct
ttaattgaggctgctgaacactacctggctccttttattgtgagcgttgttggtgaacag
ctcattcagattgtgaaggatcggaacattatcaagaatgtcatctgggaggatatggca
tctgagaacttctcacaagtgacctctgcagtacctgatcttgatagaggcccactacgt
cttacatatttttcaaatgaagacgaaatgggaagtcttgtcagtagttataagagaaac
atgggtcacttccatattttgatatttcttccaccaaggtttcaccttctttttcagatg
gaagtttcggatttttcaacattagttcgaattcgaactgatcactggccttgcttggct
tacattgatgattatttggaggctttgtttcttgcgtag
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