Benincasa hispida (wax gourd): 120068523
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Entry
120068523 CDS
T07258
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120068523
Spliceosome [BR:
bhj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120068523
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_MalT
TPR_7
TPR_12
Ribosomal_L17
UTP6_C
Motif
Other DBs
NCBI-GeneID:
120068523
NCBI-ProteinID:
XP_038876250
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All DBs
Position
12:complement(74422478..74436070)
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AA seq
831 aa
AA seq
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MGDSETVVAQTSEVMRYASGGYVSSGYADSSTNLIPHPGAFQSVITGDYSVSHTSADMGD
GNAYVTDPNSTQQGNHVVEVDETKADVVVTDHSQNAAVSENSAMETVPVAGHDSSLNGNV
AAESVNTSSVENGNIVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL
IEETEKVAEDNILKIRRVYDSFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEQAVVDVQSEAGDQVNGEEDHP
DAAEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
AELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQATDSMDLANNAL
ARASQVFVKRRPEIHLFAARFKEQNGDVAGARASYQLVHTEISPGLLEAIIKHANMEHRL
GNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGEL
SKPLIEALIHFEAIQSTAKRIDYLDSLVEKVIVPNTENATVASASMREELSSIFLEFLNL
FGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPGVASPAQSLMGV
YPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVSQAS
TYATYPPTYPAQQQAYTAQSYAQPTAQTTIAPSQQPASVAQPYYGSYYMNG
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgggggacagtgaaactgtagttgctcaaacatctgaagttatgagatatgcatctggt
ggatatgtttcgagtggctatgcagatagcagtacaaatctaattccccatcccggcgct
tttcaatctgtgatcactggggactattctgtttcacatacctctgcagatatgggcgac
ggcaatgcgtatgttacggaccccaattctactcagcaaggaaatcatgttgttgaggtg
gacgagacaaaggcagatgtggtagtgactgaccatagtcagaatgctgctgtatcagaa
aattcagcaatggaaactgtgccagtcgccggtcacgattcttctttaaacggaaatgtt
gctgctgaatcagtcaatacctcatcagtcgagaatggaaatattgttgagaatgccaac
gaggcttctgaggaacaacactttgttgatggttctgttcctccactatccgctgaagaa
gatagactgtggaacattgtgagggccaattctttagattttaattcatggacttctttg
atcgaagagacagagaaggtggcagaggacaacatactcaaaatccggagagtttatgat
tcgtttttagcagaatttcctttatgctatggttattggaagaagtatgcagatcatgag
gcacgttttggatctaccgacaaagttgttgaggtgtatgaacgagctgtacatggagtc
acttactcagttgatatttggctgcattactgcatattcactctgagtacatatggagat
ccagagaccatcagaaggctttttgagagaggattagcttatgttgggacagattatctc
tcctttcccctttgggataaatatattgaatatgagtacatgcagcaggaatggggtcgc
cttgccatgatatacacacgtatactggaaaatccaaatcaacagttggatcgttatttc
aatagctttaaggagttagctgcaagtcgaccattgtcagaattgaagagttctgagcag
gctgtagtagatgtgcaatcagaggctggtgatcaagtaaatggggaggaagatcatcct
gatgctgcagaaccatcatctaaaactgtaagtgctggcttaacagaagcagaggagttg
gagaagtatatcgccattagagaagaaatctataagaaagctaaagagttcgattctaag
atcattggttttgaaacagctatcagaaggccctactttcatgttcggccactaaatgtt
gcagagcttgataattggcatagttacctggattttatagagcaagaaggagacttaaat
aaggtagtgaagttgtatgagagatgtgtgattgcttgtgccaactatcctgagtactgg
atacggtatattttatgcatgcaagcaactgatagtatggatcttgccaataatgccctt
gctcgggcaagccaagtttttgtcaagagacgaccagagatccatttatttgctgcccgg
ttcaaggagcaaaatggggacgttgctggtgctcgtgcatcctatcaacttgtgcatact
gaaatttcacctggccttcttgaagcaattatcaagcatgctaatatggaacatcgtctg
ggaaacctggaagatgcatattccgtatatgagcaggccattgccatagaaagaggaaaa
gaacattctcgtgcattgccactgttatacgctcagtactcaaggtttctgaacttggta
tgtaagaatgaaggaaaagctagagaaattctggataaggcagttgagcacggtgaatta
tccaaaccactcattgaggccttgatacattttgaggcaattcagtctacagcaaagaga
attgattatttagattcattagttgagaaggtcatagtgcccaacacagagaatgcaacg
gttgcgagtgcttcaatgagggaggagttatcaagcattttcttggagtttctgaatctc
tttggagatgttcagtccatcaagaaggctgaggacagacatgcaaagctattcatttca
cataagagtacatcagaactgaaaaaacgccttgcggatgattatctagcctctgaaaaa
gcaaaaatggcaaaatcctatcctggcgttgcttcaccagcacaatctttgatgggtgtt
tatccaactggtcaaaaccagtgggcagctagctatggtctacaaccgcaagcctggcct
cctgtcgctcaagcacaggggcaacaatgggcacctggttatacccaatcagcctcatat
agtgggtatggaagcacatacacgaatccacaagtgtccacatcggtgtcacaagcctcc
acttatgcgacgtaccctcctacataccctgcccagcagcaggcgtatactgctcagagt
tacgcccaaccgaccgctcaaacgacaatagcaccatcacagcagccagcttcagtcgct
cagccgtattatgggagttattatatgaatggatga
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