Benincasa hispida (wax gourd): 120069113
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Entry
120069113 CDS
T07258
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120069113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhj04121
]
120069113
Ubiquitin system [BR:
bhj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120069113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
120069113
NCBI-ProteinID:
XP_038876726
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MLRMASTFPEDVLEHVFSFIQCHKDRNSISMVCKSWYEIERWCRKRVFVGNCYAVSPQIV
IRRFPDVRSLELKGKPHFADFSLVPDGWGGYVYPWILAMASAYPLLEEIRLKRMVVTDES
LELISKSFKNFKVLVLMTCEGFSTDGLAAIAANCRNLKVLDLRESDVEDLNGHWLSHFPD
TYTSLVSLNIACLGSEVSVSALERLVDRCPNLRTLRLNRPVPLDRHANLLCRAPQLVEFG
AGCYTADLRSEVFSSLTGAFTNCTELKSLSGFWDVVPAYLPSVYPTCSRLTSLNLSYATI
QCDDLTKLVTQCYNLQKLWVLDYIEDSGLEAVADTCKDLRELRVFPSELYGPEPNVSLTE
QGLVSVSEGCPKLQSVLYFCRQMTNAALVTIARNRPNMTRFRLCIMEPRTPDYLTEQPLD
VGFGAIVEYCKDLQRFSLSGLLTDRCFEYIGTYGKKLEMLSVAFAGNSDLGLHHVLSGCD
SLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKFPQLNVEVIDER
GPPNTRPESCPVERLYIYRSVTGRRLDMPGFVWTMDGDAPLRLT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatggcgagtacgtttccagaggatgtgttggagcatgtgttttcgtttata
cagtgtcataaagataggaactcgatttccatggtgtgtaagtcgtggtatgagattgag
aggtggtgtaggaagagggtttttgttgggaactgctatgcggtgagtcctcagattgta
atcaggcggtttccggatgtgagatctctggagttgaaagggaagccgcactttgcggat
tttagtttggttccggatggttggggtgggtatgtttatccgtggatcctggctatggct
tctgcttatcctttgctggaggagatcaggttgaagagaatggtggttacggatgagagt
ttggagctcatttccaagtcttttaagaattttaaggttcttgtgttgatgacttgtgaa
ggattcagtactgatgggcttgcggcaattgctgccaattgcaggaatttgaaagtgttg
gatttacgagagagtgatgtggaagatctgaatgggcattggctcagccattttcctgat
acgtatacgtcattggtgtccctcaatattgcctgtttggggtctgaggtgagtgtttct
gcattggagcgtctcgtggataggtgtccaaacttgcggacactgcgactcaatcgtcca
gttccccttgataggcatgccaacctactttgtcgtgcacctcagctggttgagtttggt
gctggatgctacacagctgacttgagatctgaagttttttctagcttaactggggcattt
acaaactgcacagaattgaagagtctatcgggattttgggatgtggtccctgcatacctt
ccttccgtttatccaacttgctctaggctaacatccttaaacctaagctatgctacaatt
caatgtgacgatcttaccaagcttgtcactcaatgttataatttgcagaaactttgggtg
ctggattacattgaagattccggccttgaagccgttgcagatacctgcaaggatcttcga
gaattaagagtgtttccatccgaactgtatgggccagaaccaaatgtgtctttgacagaa
caaggacttgtctctgtttctgaaggttgcccaaagctccaatctgttctatatttttgt
cgtcaaatgacaaatgctgccttagtgaccatcgccaggaatcgtccaaacatgacccga
tttcgtctatgtattatggagccacggactcccgattacctcacagagcagccacttgat
gtaggctttggtgccattgttgagtattgcaaagatctccagcgcttttccctctctggg
cttcttacagatcgatgttttgaatatatagggacttacggcaagaagctagagatgtta
tctgtggcatttgcaggcaatagtgatttaggtcttcatcatgtgttgtctggatgtgat
agtcttcgcaagctggagatcagggactgtccttttggtgataaagctcttttggccaat
gctgcaaagctcgagacaatgcgatccctttggatgtcttcttgctcagtgagttttgga
gcatgcaaattgttagctcagaagtttccccaactcaatgtcgaagttatagatgagagg
ggtcccccaaatacaaggcctgaaagttgtcccgtggagagactttacatataccgaagt
gtcactgggcgtcggttagatatgcctggttttgtgtggacaatggacggagatgctcct
ctaaggcttacttga
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