Benincasa hispida (wax gourd): 120069453
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Entry
120069453 CDS
T07258
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120069453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120069453
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120069453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
SPRY
Motif
Other DBs
NCBI-GeneID:
120069453
NCBI-ProteinID:
XP_038877144
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MGLPNAASGDLSSEMEVDAFRRLFPIQFYERHLAESIRPDGRGLGKARDTTIALGPVSSA
NGSALAKIGSTTMLAAIKMEVMTPFIESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVI
SKQLSDTISSSGMIDLRELSIVKGKAAWMAYLDVYCLDADGSLFDAALLSAAAAFSHLRI
PVVALNDDGKVIFVSEEEGGENFEKEPVNKERRKLKLNSIPFSLTCLLHKKYILADPTAE
EESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQGCLLCLWLFYYHSRVLLDWYALA
QGLSKLFQARSLHRFPDSWPCSLPQHCFWQRYLVFCFSM
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgggactgccaaatgctgcttctggcgacttgtcgtcagaaatggaagttgatgctttt
agacgactgtttccaattcagttttatgagcgccatcttgcggaatcaatacgtcctgat
ggaagaggtctgggaaaagctagagacacaaccattgctcttggaccagtatcatctgca
aatgggtcagccctggctaagattggttcgacgacaatgttggctgctattaagatggaa
gtaatgacgccttttatagagtcaccggatgagggttgcatagctattgatttccacatg
cctccaatatgctctccaattgttaggcctgggagaccagctgaagcagcacctgtgatt
tcaaagcagttatctgacactatttcgagttctgggatgattgatctgagagaactatct
attgtaaaaggaaaagctgcttggatggcttacttggacgtttactgtttggatgctgat
ggatctctttttgatgctgcacttctttctgcagctgccgcattttctcacttgcgaatc
cctgttgttgctctaaatgatgatggaaaagtaatatttgtctccgaggaagagggggga
gaaaactttgagaaggaacctgtcaataaagagagaaggaaactgaaattgaactctatt
cctttctcattaacatgcctactccacaagaagtacatcttggctgaccctactgcggag
gaggaatctgtcatggaaactattgtaaccgtggttttggattcatctggtcaactggtg
tccttctacaaaccgggtggatccgttcttgcttatacatcagctgttcagggttgtttg
ctatgcttatggctgttttattatcacagtagagttttattggactggtatgctcttgct
caaggtctttcaaaactttttcaagccagatctcttcacagattcccagactcatggccc
tgtagtctgcctcagcattgcttttggcaacgataccttgttttttgcttctccatgtaa
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