Benincasa hispida (wax gourd): 120069470
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Entry
120069470 CDS
T07258
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4-like
KO
K10609
cullin 4
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03420
Nucleotide excision repair
bhj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120069470
09124 Replication and repair
03420 Nucleotide excision repair
120069470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhj04121
]
120069470
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120069470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120069470
Ubiquitin system [BR:
bhj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
120069470
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120069470
TCR (transcription coupled repair) factors
Cul4-CSA complex
120069470
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120069470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
120069470
NCBI-ProteinID:
XP_038877170
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MSLPTKRSATTTANTNTNTNTAAASSVVSSSPTSNPSSISSPPMKKTKSQPLDPNKNGLH
HHDRPSSNITPDDADFDPSSMALDEDLKPDDSPLIGASRAVATNLSRKKATPPQPAKKLV
IKLVKAKPTLPANFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAVNDLCLHKMGGNLYR
RIEKECEVHISAALQSLVGQSPDLVVFLAYVEKCWQDFCDQMLMIRGIALYLDRTYVKQT
PSVCSLWDMGLQLFRKHLSLSSEVEHKTVTGLLRMIEKERLGEAINRTLLNHLLKMXTAL
GIYSESFEKPFLEYTLSFMLLKXMKHIQQSDVSEYLKHAEGRLQAEQDRCLHYLDSSTRK
PLIATTERQLLERHISAILDKGFTLLMDGNRMGDLLRMYTLISRVNALESLRQALSSYIR
RTGQNIVMDDEKDKDMVSSLLEFKASLDTIWEESFSKNEAFCNTIKDALEHLINLRQNRP
AELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGK
SASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPMGIEMS
VHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWHNSLGHCVLKAEFPK
GKKELAVSLFQTVVLMLFNDAEKLSFQDIRESTGIEDKELRRTLQSLACGKVRVLQKIPK
GRDVEDNDSFVFNDGFTAPLYRLKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIM
KTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgctctgctaccaccaccgccaacaccaacaccaacaccaac
accgccgccgccagctccgtcgtctcttcttcacccacttccaacccctcctccatctct
tcccctcctatgaagaaaaccaaatcccaaccacttgaccccaacaagaacggcctccac
caccacgaccgcccttcttccaacattactcccgatgacgccgatttcgacccttcctcc
atggccctagatgaagatctcaagcccgatgactcccctctcattggcgctagccgcgcc
gttgcaaccaatttgtcgcgtaagaaagccactccccctcagcctgccaagaaactcgtc
atcaagcttgtcaaagcaaaaccgacgctccctgctaattttgaggaggatacatgggca
aagttgaaatcagccatatgtgccatattcttgaagcaacctaattcttgtgatctggag
aagctttatcaggctgttaacgatctttgcttgcacaaaatgggtggaaacctttatcgg
cggatcgaaaaggagtgtgaagtacacatatctgcagcattgcagtctttggttgggcaa
agccccgatttggtggttttcttggcatatgttgagaaatgctggcaagatttttgtgat
cagatgttgatgattcgtggcattgccctgtatcttgacaggacatatgtcaaacaaaca
ccaagtgtgtgctcattatgggacatggggttgcaacttttcagaaaacatttatcttta
tcttcagaggttgagcacaaaactgttacgggtctattaagaatgatcgagaaagaaagg
ctaggtgaagcaattaatcggactctcctcaaccaccttttgaagatgnttaccgcacta
ggaatatactcagaaagctttgaaaagccattccttgaatacactttgagttttatgctg
ctgaagnncatgaaacacattcagcagtcagatgtttcagaatatttaaagcatgcagag
ggaaggttgcaggcagagcaagatagatgtttgcactatcttgattcaagtacaagaaag
ccattgatagcaactacagaaagacaactccttgaacgtcatatatctgcaattctcgat
aagggttttacattgctgatggatgggaaccgtatgggagaccttctgagaatgtacaca
cttatttcaagagtcaatgctctcgaatcattaagacaagcccttagctcgtatatacga
agaactgggcaaaatattgtcatggatgatgagaaggacaaagatatggtctcatcactt
ttagaatttaaggcttctcttgatacaatatgggaagaaagcttttccaagaatgaagct
ttttgcaatacaataaaggatgccttagaacatcttattaatctccgtcagaatcgtccc
gctgaactgattgcaaaatttctggatgagaagcttcgtgctggaaataagggtacttct
gaagaagaattggagggtacactggacaaagtgttggttctgttcaggtttattcagggc
aaggatgtgtttgaagccttttacaagaaggatctagcaaagcgtctacttctaggaaag
agtgcttccattgatgcagagaagtctatgatttccaaactgaagaccgagtgtggtagt
cagtttacgaacaaacttgaaggaatgtttaaggacattgaattgtctaaagagatcaat
gaatctttcaagcaatcatcccaagcgagaacaaagcttcccatggggattgagatgagt
gttcatgtcttgactactgggtactggccaacttatcctcccatggatgttaggcttccc
catgagttgaatgtctaccaggacattttcaaggagttttatttgagcaagtacagtggg
agacgtttaatgtggcataattcattaggccactgtgtgctgaaagccgagttcccaaaa
ggtaaaaaggagttggcagtttccctatttcagaccgtggtcttaatgcttttcaacgat
gccgagaaattaagttttcaagatattagagaatctactggaattgaggataaagaactc
aggaggactttacagtcacttgcctgtggaaaagttagagtactacaaaagataccaaaa
ggtagagacgttgaggacaatgattcatttgtgttcaatgatggatttactgctccactt
taccgtcttaaggtaaatgctattcagatgaaggaaactgtagaagagaatacgagcacc
actgaaagagtctttcaggaccgtcaatatcaggttgatgctgctattgttcgaataatg
aaaacccgaaaagtgctaagtcacactcttctgataactgaactcttccaacagttaaag
tttcctataaagccagctgatttgaagaagcgaattgaaagtcttattgatagagagtac
ttagaacgagacaagaacaaccctcagatatacaattaccttgcctaa
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