Benincasa hispida (wax gourd): 120070534
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Entry
120070534 CDS
T07258
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120070534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120070534
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120070534
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
120070534
NCBI-ProteinID:
XP_038878248
LinkDB
All DBs
Position
1:34934035..34951308
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AA seq
928 aa
AA seq
DB search
MEDEDEIVPVSDISDSSDEYTGINGEDFEGEDEEEEQSSSLSPSSDEDLKSKNVDALLRG
NLVVRRQSLLPRVLSVAEGAAVCRKPFKPPCSSGYDERNNQLARRLWARKRFVPWGSSKP
VSSVISNTLFLPKAAEKDVVEESVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRF
LRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMV
KKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIIS
YETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRRILLSGTPMQNDLE
EFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQRSAELSEKVNQFIL
RRTNALLSNHLPPKIVEVICCKLTPLQADLYNHFVQSKNVKRAITEELKQSKILAYITAL
KKLCNHPKLIYDTIKSGSPGTSGLESCIRFFPPEMFSGRSGAWTGGDGAWVELSGKMHVL
ARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFND
LSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF
LSTGTIEEKVYQRQMSKEGLQKVIQQESTDNLTTQVNFLSSEDLRDLFSFHDNIRSEIHE
KMNCSRCQNCCGRPEDMDEDLSTTGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPL
EEDLANWGHHFDSATVPDTILQASAGDEVTFVFSNQVDGKLVPVESMTSPRMKEAEGNGN
NSKLKQNSRQKLLLVSQHRKPLQSITSNEDLNKGPLTFTSNVFQRETMKPVRNSVEGSMH
VTLKHKHYLGNYLPQKRMSDVSECEDFE
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaagatgagattgtcccagtctctgatattagcgattcaagcgatgagtac
accggtattaatggtgaagactttgagggtgaggatgaagaagaagaacaatcgtccagc
ctttctccttcatccgacgaggatctaaaatcgaagaacgtcgatgccctcttgagaggt
aacctggttgtgagaagacaatcgctgctcccaagagttctctcagtggcagaaggcgca
gcagtttgtagaaaaccttttaaacctccatgctcaagtggctatgatgaacggaacaac
cagcttgcacgtcgactgtgggcacggaaacgatttgttccttggggctcttcaaaacca
gtgtcatctgtaatttccaacactttatttctcccaaaagctgctgagaaagatgtagtg
gaggaaagtgtaactctaccacctgggattgatcctttggtcttgtggcaacctgaagac
tctgagcttaatgtcacaaatttagcatcaataacagttgatccattgctagttcggttc
cttcgccctcatcagagagaaggtgtacagttcatgtttgaatgtgtttcagggctacat
aaggggacagacatatttgggtgcattctggcagatgatatgggtttaggaaaaacattg
cagtcgatcagcttgctttatacccttttatgtcaagggtttgatggaaagccaatggtt
aaaaaggccatcattgttacacctaccagtctcgtgagtaattgggaggctgaaattaag
aagtgggttggagaaagggttcaccttattgctctctgtgaaagttccagagaggacgtt
gtctctagcattgacagctttgtacatcccaagagttctttacaggtgctgattatttca
tatgagacatttcgtatgcattcatcaaagttcagccaaagtgaatcatgtgatttactc
atatgtgatgaggctcaccgactgaagaatgatcagacattgacaaatcgggcattggct
gccctgtcttgcaggcgtagaattttgttatcaggaactccaatgcagaatgacctagaa
gagttttttgccatggttaactttaccaatccaggaattctgggtgatgtttcacatttt
cgtcgatattatgaggcaccaattatttgtggaagagaacctattgctaccgaagaagag
aaaaagctaggtgctcaacgctcagcagaactaagtgaaaaggttaatcagtttatacta
cggaggactaatgcactcttatcaaatcacttgccaccaaagatagttgaagtcatttgc
tgcaagttgactcctctccaagcagacctatataaccatttcgtacagtcaaaaaatgtt
aagcgggcaattactgaagagctaaagcaatctaagattttggcctatataactgcactt
aagaaactttgcaatcatccaaagcttatatacgacactataaaaagtgggagtccagga
acttcaggattagagagttgtattcggtttttccctccagagatgttctctggaagatct
ggtgcatggactggtggagatggggcttgggttgaattatcagggaaaatgcatgtccta
gctaggttactagcccatttacgccagagaactgatgaccgcatcgtccttgtctcaaac
tacacacaaacgctggatttgtttgctcaactgtgtcgtgaaagaaggtacccatattta
aggcttgatggaaccacatcaatcagtaaaagacaaaagttagtcaaccgttttaatgat
ctgtcaaaggatgagtttgtttttctattgagcagcaaggctggtggatgtggtctgaat
ttgattggaggaaatcgtttagttttgtttgatcctgactggaaccctgccaatgataag
caagctgctgcaagagtgtggagggatggacaaaagaagagagtattcatttacagattt
ttaagtaccggaacaattgaagaaaaggtgtaccagcgacaaatgtcaaaagaagggtta
caaaaagttattcagcaggagtcaacagataaccttacaacgcaggtgaacttcctttcg
tctgaagatttacgggatctattctcatttcatgataacatcaggtctgaaatccatgaa
aagatgaattgcagtcggtgccaaaattgttgtggtaggcccgaggacatggacgaagac
ctgtctacaaccggaccttgtcagtctgaccaagtaacttctgacattggcggatttgca
caacttgctggatgcttggacaagttgaagaaatcagagcaacaggtagggtctcctcta
gaagaagatttagccaactgggggcaccattttgactctgctaccgtacctgataccatt
ttgcaagcttcggctggtgatgaggttacatttgttttctcaaatcaagttgatgggaag
cttgtacccgttgaatcgatgactagtccaaggatgaaagaagctgaaggaaatgggaac
aactccaaattgaagcaaaactcaaggcagaaactattattagtatctcaacatagaaaa
cctttacaatccattacttccaatgaagatcttaacaaaggtccattaacatttacttcc
aatgtctttcaaagggaaaccatgaagcctgttagaaattcagttgaaggttcaatgcat
gtaacattgaagcacaaacactatcttggaaattacttgccacagaaaagaatgtctgat
gtttctgaatgtgaagatttcgagtaa
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