Benincasa hispida (wax gourd): 120070581
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Entry
120070581 CDS
T07258
Name
(RefSeq) uncharacterized ATP-dependent helicase YprA isoform X1
Organism
bhj
Benincasa hispida (wax gourd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
WHD_HRQ1
Helicase_C
ResIII
ubiquitin
Cas3-like_C_2
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
120070581
NCBI-ProteinID:
XP_038878301
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Position
2:1175541..1202431
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AA seq
1248 aa
AA seq
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MEESVREIEIKTLTGESLTVSISGNRTIDDLKLLLRRNFPSATISPNFHLFFKGTKLKPQ
SQISACRIDHGEFLVLIPFNKKESSKSRLRDQYEQGSSVSCGSSISQFADSAWSDMVQDL
SYLHGCSDERREENRPESERGSSEVGGVDAELVATCSTSSFSSKSKGKKGFAYDDLKGNL
DDVLRKFSSSPSEGFLNEQTCESFIKYLESVDCLSDPRNGNCMLAKQANSRSGNKRAPNS
TCGSSCLCPVWLKKTMKAFSFLNVFAMFLQLQEEIMTVSRLEQAMDQLRKRGITLCMEDI
QNLSLLCPKAVHFASGRSEDTCVDRLIIIIYLTEKNGRWKDDIDNTVTSHRCCTSCKSFT
APTNVTPLKRRERSFKFYLLEAIKCHMLKHGSRREICVPFSLEALITPNETDVDGSEAKR
GKKCDTASSSQSDRRQCHDTSKLLPEKMVEHLEKGVGSEGQIVHVEDIGARKANYVEIPK
ELSNNVVSALKCIGVANLYSHQAQSIEASLAGKHVAVATMTSSGKSLCYNLPVLEAMSQN
VSSCALYLFPTKALAQDQLRSLLIMMKGFNHNLNIGVYDGDTSQADRILLRDNARLLITN
PDMLHVSILPHHRQFSRILSNLRFIVIDEAHTYKGAFGCHTALILRRLRRLCSHVYGSDP
SFIFCTATSANPREHCMELGNLSSLELIENDGSPSARKLFILWNPIMALKNYQRGIDSPQ
STKKNMTVRNPSPIMDIARLFAEMVLHGLRCIAFCKTRKLCELVLCYTREILKESAPHLV
QSVCAYRAGYTAEDRRRIESDFFGGNLCGVAATNALELGIDVGHIDATLHLGFPGSIASL
WQQAGRAGRREKTSLSVYVAFEGPLDQYFVKHPEKLFGSPIECCHIDAKNQQVLEQHLLC
AAYEHPVCVAYDQNFFGPGLNTALMSLKNRGDLIAESSCGSSKSIWNYIGQEKMPSRSVS
IRAIEAERYKVVDQRQNEILEEIEESKAFFQVTAASVYEGAVYMHQGRTYLVKSLNLSTM
LAFCEEADLKYYTKTRDYTDIHVIDGNLAYPRRAPNIPPSKTTAQANDCRVTTTWFGFYQ
IQKGSNQIIDTLNLSLPKYSYNSQAVWVPVPQSIKEEVKRKNFDFRAGLHAASHALLNVV
PLRIICNMSDLAPECANPHDTRYFPERILLYDQHPGGTGLSLQIQPVFIELLNAAFELLT
SCRCLGETGCPNCVQSLTCHEYNEVLHKDAASLIIKGVLDAEKAYCRN
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagtgtgagggaaatcgaaatcaaaactctaaccggagaatccttgaccgtt
tccatctccggcaacagaacaattgacgacctcaaacttctactcaggcggaatttcccc
tccgcaaccatttcccccaattttcacctctttttcaagggtactaaattgaaaccccag
agtcaaattagtgcgtgtcgtattgaccatggcgaatttctagttctcattccatttaat
aaaaaggagtcttccaagtctcggctacgtgatcaatatgaacaagggtctagtgtttcg
tgcggaagctcaatttctcaattcgctgattctgcgtggtccgatatggtgcaggattta
tcgtatttacatggctgttctgatgaaaggagggaggaaaatcgccctgagagtgagaga
gggagttccgaagtcggaggtgtggatgctgaattggtagcgacatgtagtactagttct
tttagttcgaaatcaaaaggaaaaaagggttttgcttatgatgacttgaaaggaaattta
gatgatgttttgaggaaattttcatcgtctccttccgaggggtttctaaacgaacaaacc
tgtgaaagctttattaagtatttggagtcggtggattgtttgtcggacccacgtaatggg
aattgtatgttagcaaaacaggctaattcacgaagtggtaacaaaagagctccaaatagc
acatgtggttcttcatgtctatgtccagtatggttgaagaagacaatgaaggcattttct
ttcttaaatgtttttgcaatgtttcttcaattacaagaggaaattatgactgtaagtcga
ttggagcaagcaatggaccagctgcggaaacgtggaattacgctttgtatggaggacata
cagaatctctctcttctatgtcccaaggcagtacattttgcaagtggcagatcggaagat
acttgtgttgataggcttatcattattatttatttgactgaaaaaaatggtcgatggaaa
gatgacattgacaatactgttacttcacatcgttgctgtacatcatgtaaatcgttcaca
gcacctacgaatgtcactccactgaagagacgggaaagatcctttaaattttatcttttg
gaggctatcaagtgccatatgcttaaacatggaagcagaagagagatatgtgtgcctttt
tctttggaagctttaatcacaccaaatgagaccgatgtggatggaagtgaagcaaagagg
ggaaaaaaatgtgatacggcttctagttctcaatcagaccgaagacaatgtcatgacact
tcaaaactcttgcctgagaaaatggttgaacatcttgaaaagggtgttggatctgagggc
cagatagtgcatgttgaagatattggggctaggaaagccaattatgtggaaattccgaag
gaactctcaaataatgttgtatcagcactcaaatgtattggagtagcaaacttgtatagc
catcaggcacagtcaatagaagcctccctcgctggaaagcatgttgctgttgccacaatg
acgtcaagtggaaaatctctgtgctataacttgccagttcttgaagcaatgtctcaaaat
gtctcatcatgtgctctttacttatttccaactaaggccttagctcaagatcaactcaga
agcttgctcatcatgatgaaaggatttaatcataaccttaacattggcgtttatgatggg
gatacatcacaggctgacaggatattgttgcgtgataatgctaggctgttaatcacaaat
ccagatatgctacatgtatcaatcctgccacaccacagacaatttagtagaatattatca
aatcttcggtttatagtcattgacgaggctcatacttataagggagcatttggatgtcat
accgcactaatactacggagacttcgccgactatgctctcacgtgtatggaagtgatcct
tcttttatattctgcacagcaacctctgcaaatccccgtgaacattgtatggaacttgga
aatctgtcaagcttagagctgattgaaaacgatggaagtccgtctgccagaaaacttttc
atcctctggaatcctattatggccttgaaaaattatcagagaggtattgattctccgcag
agtacaaaaaagaacatgacagttagaaatccaagcccaattatggacattgcgaggctt
tttgcagaaatggttctgcatggacttcgctgcattgctttttgtaaaactcgtaaactt
tgtgaactcgttttatgctacacgcgtgaaattctcaaggagagtgcaccccatctggtt
cagtctgtgtgtgcttatcgtgctggatacactgctgaggataggaggagaattgagagt
gacttttttgggggaaacctttgtggcgttgctgcgacaaatgcccttgaattgggtatt
gatgtaggccatattgatgcaactctgcatctgggttttcctggcagtattgccagcttg
tggcaacaagcaggcagggcaggaaggagagaaaagacttctctttctgtgtatgttgca
tttgaagggcctcttgaccaatatttcgtgaaacaccctgaaaaactttttgggagccca
attgagtgctgccatattgatgctaaaaaccaacaggttcttgaacagcatttgttgtgt
gctgcatatgaacacccagtatgtgtggcttatgatcagaatttttttggtcctggctta
aacactgccctaatgtctctgaaaaatagaggggatttgattgctgagtcatcatgtggt
tcatccaaaagtatatggaactatattgggcaagagaaaatgccttcccgctcagttagt
atccgagccattgaagcagagagatataaagttgtagaccagcgtcaaaatgaaattctc
gaagagattgaggaaagcaaggctttctttcaggtgactgctgcttcggtatatgaaggt
gctgtctacatgcatcaagggcgaacatatcttgtcaaaagcttgaatttgtcgactatg
cttgctttctgtgaagaagctgatctaaaatattacacaaaaacacgcgattacactgac
attcatgttattgatggtaatttggcctatccaaggagagctccaaatattccgccctca
aagacaactgcacaagcaaatgattgtagagttaccaccacttggtttggtttctatcaa
atacagaaaggaagtaatcaaattattgacaccctgaacctctcacttccaaaatattca
tacaactctcaggcagtctgggttccagtaccacaatcaataaaagaagaggtgaaaagg
aaaaactttgactttcgtgcaggcttgcatgctgcttcacatgctcttctgaatgtagtg
ccattacgcataatatgcaacatgtcagacttggctcctgaatgtgcaaatcctcatgat
actcgctattttccagaaagaattctgttgtatgatcaacatcctggaggaactggtctg
tcactacagattcaacccgttttcatagagctgttgaacgctgcttttgaacttctcacc
tcttgccgctgcttaggagagaccggctgccctaattgtgtccaaagtctgacctgccac
gaatacaatgaggttttacacaaggatgcagccagtttaattatcaagggcgttctggat
gcagagaaagcatattgcaggaattag
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