Benincasa hispida (wax gourd): 120071135
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Entry
120071135 CDS
T07258
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120071135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120071135
03009 Ribosome biogenesis [BR:
bhj03009
]
120071135
Enzymes [BR:
bhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120071135
Spliceosome [BR:
bhj03041
]
Complex A
U1 snRNP components
U1 related factors
120071135
Complex B
120071135
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
Pre-60S particles
Helicases
120071135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
120071135
NCBI-ProteinID:
XP_038879141
LinkDB
All DBs
Position
2:complement(9814548..9819090)
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AA seq
620 aa
AA seq
DB search
MNPYDHRYNDPNSYRERRSDLVGLQPAGPPPIVGRESLYKGYQPPPVPYYGRERGGGGAL
PNAGGFNGFPRFQPPAGPFNIGRGGSGSGNSGGGRRMFDSGRGGRRTGGNIGFGGGRGGG
TGFDGRAGGRGAGRGGGSSRGDLDNIVLPNQNFGNLVPFEKNFYTECPSVRAMTESEVKI
YRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAMKGRDLI
GIAETGSGKTLAYLLPALIHISAQPRLAHGEGPIVLVLAPTRELAVQIQQEATKFGLRAN
IRSTCIYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD
MGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQ
VVEVLPESEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQ
AERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA
KGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASSSGFGGSSAKFRPQGHRGGFG
NRTMVSGSNAIPLGLATRPR
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttatgaccatagatacaacgatcccaattcctaccgagaacgccgaagtgac
cttgtgggtctacagcctgctgggccaccgccaatagtagggcgtgaatccttgtacaaa
ggttatcaacctcctccagttccatactatggccgtgaaagaggtggaggaggtgcttta
cctaatgcaggaggcttcaatggcttcccacggtttcagcctcccgcaggaccgtttaat
atcggccgcggtggcagtggttccggtaacagcggtggtggtcggagaatgtttgattcg
gggaggggcggtagaagaactggtgggaatattggttttggaggtggacgtggtggaggc
acgggatttgacggccgtgctggcggaagaggggctggacgtggtggtggttcttcaaga
ggggatttagataacatagtccttccgaatcagaattttggcaatttagtcccttttgaa
aagaatttctacactgagtgtccttctgttcgtgcaatgacggagtctgaagttaagatt
tacagagagaggcgtgatattagagtggaaggatacgatgttccaagaccgattcggagt
tttcaggaggcgaattttcctgcttactgccttgatgtaattgcgaaattgggatttgtt
gagccaactccaattcaggctcaaggatggccgatggccatgaaaggaagagatttgatt
ggcatcgctgagactggttctgggaagactctagcctatctactgccagctttaatacac
attagtgcccagcctcgtttagcgcatggtgaaggtcctattgtgttggtgttagcaccc
actagagaattagctgttcaaattcaacaagaggctactaaattcgggttgcgtgctaat
attagaagtacttgcatttatggtggggcgccgaagggccctcaaattcgtgatcttaaa
aatggtgttgagattgttattgctacacctggtcggctcatagatatgctcgaagctggc
cacactaacctgcggcgagtgacttaccttgttttagatgaagcggatagaatgctggac
atgggatttgagcctcaaataaggactatcgttagccaaatccgacctgataggcagaca
ttatattggagtgccacatggccaagggaggttgagaaattggctagacaatttttacgt
aatgcatataaggtgattattggttcaccagatcttaaagctaaccagtctataaaccaa
gtcgttgaagttttgccagagtctgaaaaatatagaaggttaataaaattgcttgtagaa
gtgatggatggtagtcgtattctgatttttgtggaaacaaaaaagggatgtgataaagta
acgagacaattgagaatggatggatggccagctctatccattcatggcgataaaaagcag
gctgaaagggacttggttttgtcagaatttaagagtggaagaaaccccataatgacagcc
acagatgtggctgcaagagggcttgatgtgaaagatataaaatgtgtgatcaactatgat
ttcccatcaagcctcgaggactacgtccacaggattggccgaacgggtcgtgctggtgca
aagggaactgcattcacattctttactcatgagaatgcgaaacatgctagagatcttata
aagatactgcgagaagcagggcagattgtcacccctgcattgtctgctttagcctcgtct
agtggctttggaggttctagcgctaaattccgccctcaaggacacagaggtggctttggt
aatcgaacaatggtttcgggatcaaatgcgatccctcttggtttggcgacaaggcctcgc
tag
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