KEGG   Benincasa hispida (wax gourd): 120071144
Entry
120071144         CDS       T07258                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120071144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhj03019]
    120071144
Messenger RNA biogenesis [BR:bhj03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     120071144
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     120071144
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 CHASE5
Other DBs
NCBI-GeneID: 120071144
NCBI-ProteinID: XP_038879159
LinkDB
Position
2:31097910..31120003
AA seq 197 aa
MKEGEEETTEFVTPGEVLGIFSDFRPGRGAYVFNNTVYASLSGFRRTIPPPTDSSDLRST
VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRAME
IDKVDMHLSFRPGDVVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ
CPLTGQIQQRKVAKVGG
NT seq 594 nt   +upstreamnt  +downstreamnt
atgaaagaaggcgaggaagagactactgagttcgtcactccaggtgaagttctcggaatc
ttttccgacttcagacctggaagaggcgcttatgtcttcaacaacactgtttatgcttct
ctttctggtttccgccgcactattcctcctcccaccgactcttcggatctaagatcaact
gtggaagtgactggtcataaggcccatggtgctgttccagctcctggatctattgtcata
gctcgagtcacaaaagtaatgtctaaaatggcatcagctgatatcatgtgtgttggtcca
aagtctgtgaaagagaagtttactggaattataaggcaacaagatgttcgagcaatggag
atcgataaagtagatatgcatttgtcatttcgtcctggtgacgttgtgaaagctcttgtt
ctttctcttggagatgcaagggcctatcatctatcaactgcaaaaaatgaactcggcgtg
gtctctgcagagagcacagcaggtgcagtgatggttcccataagttggacagaaatgcag
tgtccattaacaggccaaattcagcaaagaaaagtagccaaagttggaggatga

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