Benincasa hispida (wax gourd): 120071198
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Entry
120071198 CDS
T07258
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03015
mRNA surveillance pathway
bhj04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120071198
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120071198
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bhj01009
]
120071198
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120071198
03036 Chromosome and associated proteins [BR:
bhj03036
]
120071198
Protein phosphatases and associated proteins [BR:
bhj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120071198
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120071198
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120071198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
120071198
NCBI-ProteinID:
XP_038879246
LinkDB
All DBs
Position
2:8857788..8864440
Genome browser
AA seq
509 aa
AA seq
DB search
MTVGNDSLCAPLEWKFSQVFGERVAGEDIQNVDIISAIGFDKSGDNLAVGDRGGRVIIFE
RKDRKDTSKNYPTRNKLEQLNLTPACHPEYQYKTEFQSHEPEFDYLKSLEIEEKINKIKW
CVSPNGSRFILSTNDKTIKLWKVKEHKVKSVKEMNPNRFVSSENALLAENSFNSEQDKVS
LFNGRHWNWPENMAMNKVASKDIHDMIADQDNTSRRRCRKVYAHAHDYNINSISDNSDGE
TFISADDLRINLWNLEISDQCFNIIDMKPSNMEDLTEIITSAEFDPLHCNLLAYSSSRGF
IRLVDMRQSALCDHSAILLRTEELNRPKSFFTEIISSISDIKFSSDGRFIISRDYMNLKL
WDIHKCSSPVAVFKIHEHLRPRLCELYDNDSIFDRFGCCLSADGLHFATGSYSNQLRMFS
YGSGSSEGITTEAGKIPDRKPHLQTTRRARRSSLSNLTRDFFRHGNEHSSLDNNETSVDL
NSKLLHLAWHPSENLIACAAGSGLFIYYA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaggcaacgattcgttatgcgctcctcttgaatggaagttctctcaggtcttc
ggtgaacgagttgccggagaggatattcagaatgttgatatcatatcggcgattggattt
gataagagtggtgacaaccttgccgttggggatcgaggtggtcgtgttattatatttgag
agaaaggacaggaaggatacttcaaaaaactaccctacacggaataagttggagcagttg
aatcttactcccgcatgtcatcccgaataccaatacaagactgaatttcagagtcatgag
cctgagtttgattacttgaagagtttggaaattgaggagaaaattaataaaataaagtgg
tgtgtatcacccaatggatctcgcttcatcctttcaacaaatgacaagactattaaatta
tggaaggttaaggagcataaggtgaaatctgttaaagagatgaaccccaatcgatttgtg
agttcagagaatgcacttttggcggaaaacagtttcaatagcgaacaagacaaagtatct
cttttcaatggccgccattggaattggccagagaatatggcaatgaacaaggtagcctct
aaagacattcatgacatgattgctgatcaagacaacacttctcggagaagatgccgtaag
gtgtatgctcatgctcacgattataatattaactccatttctgacaatagtgatggtgag
acatttatttctgcagacgacttgcgaataaacttatggaaccttgagattagtgatcag
tgtttcaatatcattgacatgaagccttcaaacatggaagatcttacagagatcataacg
tcggctgaattcgatcctctgcactgtaatcttcttgcgtacagcagctcaaggggtttt
attcgtctagtggacatgcgccagtctgcattatgtgatcatagtgcaattctattacgg
actgaagaactgaatcgaccaaaatcattttttacggagatcatttcatccatttcggat
ataaaattttcaagtgatggacggtttatcattagccgggattacatgaatttaaagctt
tgggatatccacaagtgttcttccccagttgcagttttcaagatccacgagcacctgcgg
ccaaggttgtgcgagctgtatgataacgattccatatttgatagatttggatgttgcctt
agtgcagacgggcttcactttgcaactggatcttatagcaaccaattacggatgttctct
tatggctctggaagttcggaagggatcactacagaagcgggaaagattcctgataggaag
ccacatctccaaaccactcgacgtgcgagaagatcgtctttaagcaatttaacacgtgat
ttttttcggcatggcaatgaacactcaagcttagacaataatgaaacttctgttgacctg
aactccaagttacttcatttagcgtggcacccatcagaaaatttaatcgcatgtgctgct
ggaagtggcctgttcatctattatgcgtaa
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