Benincasa hispida (wax gourd): 120071203
Help
Entry
120071203 CDS
T07258
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhj03016
]
120071203
Enzymes [BR:
bhj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
120071203
Transfer RNA biogenesis [BR:
bhj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120071203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
120071203
NCBI-ProteinID:
XP_038879253
LinkDB
All DBs
Position
2:complement(12579934..12590549)
Genome browser
AA seq
389 aa
AA seq
DB search
MTSKRKREEEGMGVGEIVWQTPANPPQRSDYIFHNGRRHVRPYYFEFIAHVKNRWAGKTI
VDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMAWGV
KILKEEAEVLTVCKPASVPVHPCGQYRKNTVVGILEAEHGLAPLFPIHRLDRLVSGLLIL
ARNASKADLFRQQIESGLVKKQYIARVVGVFPEAEQVVDVNINYNAREGRSTAEMVDSCA
NTPIKGKAAQTKFTRISSDGVQSIVLCEPITGRTHQIRVHLQYTGYPIANDTLYLTKEAS
GRSVEKTTADRAAAISNCSAACDIEEDCVNAREENWSEDFRIDPMCTNCPNLAPKGYDGE
EEGLWLHCVQYSGPGWIYECPYPQWASLK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaagaggaaaagggaagaagagggcatgggagtgggagagatcgtatggcaa
acccctgccaaccctccacaacgaagcgattatatatttcacaatgggaggcggcacgtt
agaccttactacttcgagttcattgctcatgttaaaaatcggtgggccggtaaaaccatt
gtcgacttatttgctgaagagttcaaaggccggccttacgagtactatgttgatgctgtc
aaatgtggtcgcatacaagtcgatggggagatggtgcctgtttcatatatagttaaatca
tctcaaaagataagccatttcctgcacaggcatgaacctccggtaatggcttggggcgtg
aaaattctcaaagaagaagcagaagtgctcacggtttgcaagcctgcatctgttccggtt
catccatgtggtcaatataggaaaaacacagttgtcggtatacttgaagcagagcatggt
ttggcacctctatttcctatacatcgactagaccgccttgtttcaggacttcttattctt
gctagaaatgcatccaaagctgaccttttcagacaacagattgagtctgggctggtgaag
aagcagtatattgcaagggtagtgggtgtatttccagaagcagagcaagttgttgatgtt
aatataaattacaatgctcgagagggaaggagcacagcggagatggttgattcttgcgct
aatactccaataaaggggaaggctgctcaaacaaagtttacgcgcatcagttccgatgga
gtccaaagcattgttttatgtgaaccgatcactggccgaactcatcaaatccgtgtgcat
ttgcaatatacaggttatcccatagccaacgatacactgtaccttacaaaagaagcttca
ggtcgttccgtggaaaaaacaactgcagatagagctgctgcaatatcaaactgttctgcg
gcatgtgatattgaagaagattgtgttaatgcacgcgaagaaaactggagtgaagatttt
agaattgatcccatgtgtacaaactgtccaaatttggctccaaagggatacgacggagag
gaagagggtctgtggctgcattgtgttcagtactctggaccaggatggatctacgaatgc
ccatatccacaatgggcttcacttaaatag
DBGET
integrated database retrieval system
