Benincasa hispida (wax gourd): 120071265
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Entry
120071265 CDS
T07258
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120071265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120071265
03110 Chaperones and folding catalysts [BR:
bhj03110
]
120071265
03029 Mitochondrial biogenesis [BR:
bhj03029
]
120071265
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120071265
Enzymes [BR:
bhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120071265
Messenger RNA biogenesis [BR:
bhj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120071265
Chaperones and folding catalysts [BR:
bhj03110
]
Heat shock proteins
HSP60 / Chaperonin
120071265
Mitochondrial biogenesis [BR:
bhj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120071265
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120071265
Exosomal proteins of other body fluids (saliva and urine)
120071265
Exosomal proteins of breast cancer cells
120071265
Exosomal proteins of colorectal cancer cells
120071265
Exosomal proteins of bladder cancer cells
120071265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120071265
NCBI-ProteinID:
XP_038879361
LinkDB
All DBs
Position
2:complement(47264344..47269773)
Genome browser
AA seq
605 aa
AA seq
DB search
MASTFTAIGTLAAPGSRVMDKKLLSSSEKLTSRTSISSFALPRRQSVVLRRNRSSKISAM
AKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEV
ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGI
EKTAKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGR
SADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFENCKLLLVDKKITNARDLINILEDAI
RGGYPVVIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGATVI
REEVGLSLDKAGKEVLGHASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKNLIEAAEQDYE
KEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLR
LASKVDAIKESFENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNYRYGY
NAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDN
SGYGY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactttcacagcaattgggacccttgctgcgcctggaagccgtgtaatggat
aaaaagcttttatcatcttctgaaaagttgacttctcgcacatccatttcttcatttgca
ctcccgagaagacagagcgtagttctaagaagaaaccgttcttccaagatctctgccatg
gccaaggagttgcacttcaaccaggatggctcggctattaagaaattacagaacggtgtg
aacaaacttgcagacttagttggagttactcttggacccaaaggaaggaatgtggttcta
gagagcaagtatggctccccaaaaattgttaatgatggtgtaactgttgcaaaagaggtt
gaattggaggatccagttgagaacattggtgctaagctagtcagacaagctgctgcgaag
accaacgatttagctggtgatggaactacaacttcagttgttttggctcagggtcttatt
gctgaaggtgtcaaggtagtagcagctggagcaaaccctgttcttatcacaagaggcatt
gaaaaaactgccaaagccttggtctctgaactcaaacaaatgtcaaaagaggttgaagac
agcgaattggccgatgtggctgcagttagtgctggaaacaactatgaagtgggtaatatg
attgctgaagccatgagcaaggtaggaaggaagggtgtggtgactcttgaagagggaaga
agtgctgataacagtctctacgttgtcgagggaatgcagtttgacaggggttatatctct
ccttattttgttactgatagtgagaaaatggctgtggaattcgagaactgcaagctgctt
cttgttgacaaaaagatcaccaatgcaagggatctcattaacatactggaggatgctatc
agaggtggctatcctgtcgtgataatggcagaggatattgagcaagaagctctggcaact
cttgttgtaaataaattgagaggatctttgaagatcgctgcacttaaagctcccgggttt
ggagaacgcaagagccagtaccttgacgatattgctattctcactggagccacggttatc
agagaggaggtagggctttccttagacaaagctggaaaagaggtacttggacatgcatcc
aaggtagtgcttaccaaagataccacaacgatcgttggtgatggtagcacccaagatgca
gtgtctaagcgtgttgcacagattaaaaatctgattgaggctgcagaacaggactatgag
aaagagaaacttaatgagagaatcgctaaactttctggtggtgtagcagttatacaggtt
ggagcacaaactgagacagaactcaaggaaaagaaattgagagttgaagacgctcttaat
gctacaaaggcagctgttgaggaaggtattgttgttggtggtggttgcaccctcctcaga
cttgcatcaaaggtggatgccatcaaggaatcctttgaaaacgatgaggagaaggttgga
gcagacattgtcaagagagcattgagttatcccctcaagctgattgcaaagaatgccgga
gtcaacggtagcgttgttagtgagaaggtattatccagtgacaactatagatatggatac
aatgctgcaactgggaagtatgaagacttgatggctgctggaatcatcgatccaaccaag
gtggttagatgctgcttagagcatgcagcttcagtggcaaagacattcttgatgtcagat
tgtgtggtggtggagatcaaggagcctgaaccagttcctgctggcaatcccatggacaat
tcaggatacgggtattga
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