Benincasa hispida (wax gourd): 120071294
Help
Entry
120071294 CDS
T07258
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120071294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120071294
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120071294
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120071294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
120071294
NCBI-ProteinID:
XP_038879414
LinkDB
All DBs
Position
2:complement(12522434..12538874)
Genome browser
AA seq
315 aa
AA seq
DB search
MRGLQISLNHTQNIRLQKARETLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLN
GEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQYAVLM
LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQ
LLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDSTEDMMIEDQVSKAEQERV
YTPLNTRQNICRTANAIRVLSSLGFIMTVEVIMETVSLSISQNVDVHEMLGSEFFVLTAE
KEVERRRHTSSKKRG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtctacagatttctttgaatcatacccagaatattcggctccagaaagcccga
gaaacgctcgaatctctctcttcaaaggccaattctgatgcttcggttatagttgctgat
actattcctctcaattacgaggatggtgtcctcaagggacatgggacccttgacttgaat
ggagaagtagttgccactatttgtggagtggttgagcgagtcaataagcttatctatgta
cgtgccttacgtgccagatataaaccggaggttggtgatatcgtggtgggacgtgttaca
gaggttgctccaaaacgttggagattggatataaattatagtcaatatgctgttttgatg
ctttcttcgatgaacttgcccgatggtattcagaggaggcgaactgcagttgatgaactc
aacatgcggagcatttttgaagaaaatgatgttatttgtgcagaagtacgtggttttcag
catgatgggctacaccttcaagccagaagccagaagtatgggaagcttgaacgtggtcag
cttttaacagtttcaccatatctagtaaagagacgcaaacaacacttccatcatttggag
cagtatggtattgacttaatacttggatgcaatggatttatctggatcggggaacatgtt
gattctacagaggacatgatgatagaagatcaagttagtaaagctgaacaggaaagagta
tatactccattaaatacacgacagaatatatgcagaactgcaaatgcgattcgagtattg
tctagcttgggctttataatgacagtagaagtcattatggagacagttagtctaagtatt
tctcagaatgttgatgtgcatgaaatgcttggttcggagttctttgtcctcactgcagaa
aaagaggttgaacggcgtaggcatacttcgagtaagaagagggggtga
DBGET
integrated database retrieval system
