Benincasa hispida (wax gourd): 120071344
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Entry
120071344 CDS
T07258
Name
(RefSeq) cell division cycle protein 48 homolog isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120071344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120071344
03009 Ribosome biogenesis [BR:
bhj03009
]
120071344
04131 Membrane trafficking [BR:
bhj04131
]
120071344
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120071344
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120071344
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120071344
Membrane trafficking [BR:
bhj04131
]
SNARE
SNARE associated proteins
Others
120071344
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120071344
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120071344
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
nSTAND_NTPase5
Parvo_NS1
AAA_18
ABC_tran
Viral_helicase1
NB-ARC
AAA_7
NACHT
AAA_lid_PRS2_C
Vps4_C
DUF815
TsaE
IstB_IS21
ResIII
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
120071344
NCBI-ProteinID:
XP_038879487
LinkDB
All DBs
Position
2:9404350..9409717
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AA seq
818 aa
AA seq
DB search
MTEPTGSSVTDKGHEPSSSSDQKSTKRDFSTAILERKKSPNRLVVDEAINDDNSVVSLHP
ATMEKLLFFRGDTILLKGKKRRDTVCIVLTDDQCEESKIKMNKIVRANLRVRLGDVVSIH
QCPDVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEF
KVIETDPGEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPL
RHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESES
NLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRAHVIVI
GATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERVARDTH
GYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMSVTNEHFQTALGSSNPSAL
RETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK
TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT
QRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY
IPLPDESSRLQIFKACLRKSPVAKDVNLSALARYTHGFSGADITEICQRACKYAIRENIE
KDLERERKQGENLEAMEEDDIDDVSEIKAAHFEESMKYARRSVSDSDIRKYQLFAQTLQQ
SRGIGSEFRFPDRTENAAAGAADPFASTMGAGDDDLYS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccaacaggctcatcggttactgataagggccacgaaccctcttcttcatcg
gaccagaaaagtactaaacgggatttttccactgcaattttggaacgcaagaagtctcca
aatcgtttagttgttgatgaggctataaatgacgataactctgtggtttctttgcatcct
gctaccatggaaaagctactgttctttagaggagatactattttattaaaggggaagaag
cggagagatacggtgtgtattgtactcactgatgatcaatgtgaagagtcaaaaatcaaa
atgaataaaattgtacgagccaatctcagagttcgtcttggagatgttgtatctatccat
cagtgtcctgatgtgaagtatggaaagcgggttcatatcctccctgttgatgatacaata
gagggtgttactggcaacctatttgatgcatatttgaaaccttatttcttggaagcatat
cgaccggtaaggaagggtgacctgttcttagtccggggtggaatgagaagtgttgagttt
aaggtcatagaaacagaccctggtgaatactgtgttgttgcacctgataccgagatcttc
tgtgagggagagcccatcaaacgtgaggatgaggagagattaaatgaagttggatatgat
gatgttggaggtgtcaggaagcaaatggctcagattcgtgagttagtagaattaccactt
agacacccacaacttttcaaatcaattggtgtaaagcctccaaaagggatattgctatat
gggcctcctggatctggaaaaactcttatagcaagagctgttgctaatgagacaggtgca
ttcttctttttgattaatgggccggaaataatgtcaaagttagctggtgagagtgaaagt
aatctgaggaaggcatttgaggaagctgaaaagaatgccccctcaattatatttattgat
gagcttgattctattgcaccaaagagggagaaaacacatggagaagtggaaagacgtatt
gtgtcccaacttcttaccttgatggatggcctcaagactcgagcacatgttattgttatt
ggagcaactaatagacccaattcaattgatcctgctttgaggagatttggaagatttgat
cgggagattgatatcggtgtacctgatgaagtaggacgattggaagttcttaggatccat
acaaagaacatgaaacttgcagaggatgttgatcttgagagagttgcaagggatacccac
ggttatgttggtgctgatcttgccgctctttgcactgaagcagcactccagtgtattagg
gagaaaatggatgtcatcgacttggaagatgaaacaatagatgccgaggttttgaattcc
atgtctgtaaccaatgaacatttccaaactgctttagggtcttctaatccatcagccttg
cgagaaactgttgtggaggttccaaacgtttcatgggatgatattggtgggttggaaaat
gttaaaagagagctccaggagactgtccaatacccagtggagcatcctgagaagtttgaa
aaatttggcatgtcaccatctaaaggtgttctcttttatggtccccctggctgtggtaaa
acgctacttgctaaggcaattgccaatgaatgccaggccaactttataagtgtgaaagga
cctgagttgctgacgatgtggtttggtgaaagtgaggcaaatgtgagagagatatttgat
aaggctcgtcagtcggctccatgtgtactatttttcgatgaactcgattctatagcaact
cagcgtggtagttctgttggagatgctggtggggcagcagatagagtcttgaaccaactt
cttacagaaatggatggcatgactgcaaagaagactgtattcataattggggcaacaaac
aggccagacattatagaccccgcgctgctgaggccgggacgcctggaccaattaatatac
atcccactccctgacgagtcttctcgtcttcaaattttcaaagcatgtctgcgaaagtca
ccggtggctaaagatgtcaatctatcagctcttgcacggtacacccatggctttagtgga
gctgatatcactgaaatatgtcagcgtgcctgcaaatatgccattagagaaaatattgag
aaggatctcgaaagggagagaaagcaaggtgaaaacttggaagccatggaagaagacgac
atcgatgacgtctcggagataaaggcagcacattttgaggagtcaatgaagtatgctcga
cgaagtgttagtgattcagacatcaggaagtaccagctctttgctcagaccctacagcaa
tctcgtgggattggttctgagtttcggttccctgatcgaaccgagaatgcagcagcggga
gctgcagacccatttgcttcgactatgggtgctggagatgatgatctttacagctga
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