KEGG   Benincasa hispida (wax gourd): 120071856
Entry
120071856         CDS       T07258                                 
Name
(RefSeq) histone deacetylase 6-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03082  ATP-dependent chromatin remodeling
bhj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120071856
   03083 Polycomb repressive complex
    120071856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bhj03036]
    120071856
Enzymes [BR:bhj01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120071856
Chromosome and associated proteins [BR:bhj03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     120071856
   HDAC complexes
    Sin3A-HDAC complex
     120071856
    BRAF-HDAC complex
     120071856
    REST complex
     120071856
    SHIP complex
     120071856
    MiDAC complex
     120071856
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120071856
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120071856
  Chromatin remodeling factors
   NuRD complex
    120071856
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 120071856
NCBI-ProteinID: XP_038880184
LinkDB
Position
2
AA seq 465 aa
MADDIYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR
RMEINRPYPAGTEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLF
GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH
RRVLYIDIDVHHGDGVEEAFYITDRVMTVSFHKFGDFFPGTGHIKDVGVGTGKNYALNVP
LNDGMDDDSFRGLFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRF
LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYALHIEP
SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEEVEENIERRPKRRIWN
GEDYDSDSEENRKRPNISEGTGVNNMTRDVVDGMEEDKNMDHQSC
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggcagatgacatttacggcggcgcttcacttccatcaggtcccgatggtcggaaacgc
cgtgtgacctacttctacgagcctacaatcggcgattactattacggccaaggccatccg
atgaaacctcaccgtatccgcatggcccataatctcatcgttcactacggccttcaccgt
cggatggagatcaaccggccctatcctgccggtactgaggatatccggaggtttcactcc
gacgactatgtcgattttctcgcctccgtcagccccgaaacgctgtcggatcacgctttc
tctcgccatctcaagcgctttaatgttggtgaggactgccctgtttttgatggcttgttc
ggcttctgccaggcctctgctggcggctccattggtgctgctgtcaagctcaatcgcggc
gatgctgatattgctatcaattgggctggtgggcttcatcatgctaaaaagtctgaggcc
tccggtttctgttacgtcaatgatattgtattggggattcttgagctgctgaagtatcac
aggcgtgtactatatattgacattgatgttcatcatggtgatggcgtggaggaggcattt
tacattactgacagagtaatgacggtctcctttcataaatttggggatttctttccaggg
actgggcacattaaggatgttggagtagggactggtaaaaactatgcccttaatgtcccc
ttaaatgatggaatggatgatgacagttttcgtggtctgtttaggccactcattcaaaaa
gttatggaggtgtatcagcctgatgcagtagtactccaatgcggagctgattcattgtct
ggtgataggttggggtgcttcaacttatctgtgaagggccatgcagattgtcttcgtttc
ttgagatcatttaatgttcctttaatggtattaggtggaggaggatatacaatccgcaat
gttgctcgctgctggtgttacgagacagcagttgctgttggagttgaacctgacaataaa
ttgccttacaacgagtatttcgagtattttggacctgattacgcgcttcacatagaacca
tcgaacatggagaatctaaattcacctaaagatatggaaaagataaggaacaccctgctg
gagcaactctctagactcccacatgcacccagtgtaccgttccagatgactccctcgtca
gaagttccggaagaggttgaagagaacattgaacgtagacccaaacgccgtatttggaat
ggtgaggattatgattctgattctgaagaaaacagaaagcgaccaaacattagtgaaggg
actggtgtaaataacatgacaagggacgtagtagatggtatggaggaagataaaaacatg
gaccatcaatcttgttga

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