Benincasa hispida (wax gourd): 120072060
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Entry
120072060 CDS
T07258
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhj03036
]
120072060
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
120072060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
zf-PHD-like
zf-RING_16
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
120072060
NCBI-ProteinID:
XP_038880409
LinkDB
All DBs
Position
1:complement(49813921..49833819)
Genome browser
AA seq
1811 aa
AA seq
DB search
MNLPPSASASASASGNRGIGLSNTIHSEVAPCLPLPSLPVFFGASEPQLRLFDEPDGSYA
TSTTDLLAQSKKIADLLRATDVSYLNLREDAKVLQEGSVEPFELYEEVLRHDADAFNYTA
PGPIMEHVSSSTVSDRKVFDQRLHIRSQVEGDSRTTQNHKPETMPTNDTPISSSRKVKVK
KKGRDETSSVRTDPSELQDTTLANFREFLEDFCARAEIVGDDRDESEWLALPLTDLRVLV
NEIMSIRSKKLLHLVPLDNLTRLLKVLDNQIHRAEGLSVEECEHLDSDAVETIFCALESI
HASLTIMAHDQMPKLLYKEEIIERILEFSRRHIMDIMCAYDPSYRALHKASENGVFEVNE
DEELDGDYGSSTKKRRAVKTTKIRKPASNKVSTAVNTILQKMCTIVGLLKDLLLIERLPD
SCILQLVKTSFSTFLVDNIQLLQLKAIGLICGIFYSYTQHRNYLIDELVQMLFKLPSTKR
ALRAYHLPEEEQRQIQMITALLIQLVHYSANLPEALRQASDSNSIFEVSVDSSCPTKCHE
AATEACCLFWTRVLQRFANVKTQDASEVKVMMENMVLDLLTTLNLPEYPASAPILEVLCV
LLLQNAGLKSKDISARSMAIDFLGMIAARLKRDAVICATDKYWILQELGDKEDDADQGYS
KDVCSICLDGRVEKYILVCQGCQRLFHADCMGGRENEVPNRGWNCQICHSRKQLLVLQSY
CKSQCKNDSEKRKDRSDKGSKVSWLVSNIEIVQQLLLNYLQEVGPADDLHLFVRWFYLCL
WYKDDPKSEQKFIYYLSRLKSMAIVRDGGNTSSLLTRDSVKKITLALGQNNSFSRGFDKI
LHMLLASLRENSPVIRAKALRAVSIIVEADPEVLGDKRVQLAVEGRFCDSAISVREAALE
LVGRHIASHPDLGFKYFEKIAERIKDTGVSVRKRAIKIIRDMCTSNANFSEFTRACIEII
SRVGDDESSIQDLVCKTFYEFWFEEPSSSQTQFFGDDSSVPLEIAKKTEQIVEVLRKMPN
HHLLVTVIKRNLALDFFPQSTKAVGINPVSLTSVRKRCELMCKCLLERILQVEERSNMDT
EVRALPYVLVLHAFCVVDPMLCAPASNPSQFVVTLQPYLKSQVDNRVVAQLLESIIFIID
AVLPLLRKLSTNVAEDLEQDLKHMIVRHSFLTVVHACIKCLCSLSKIAGKGAWVVEYLIQ
MFFKRLDSQGVDNKQLVGRSLFCLGLLIRYGSPLLSNSSNKNVDIAKSLSLLKMYLQTED
LVIRVRALQALGFVLIARPEFMLEEDVGKIVEESLSSGSDVRLKMQALQNMYDYLLDAES
QMGIDEPGDGAGPDNGEGGQSVPVAAGAGDTNICGGIVQLYWERILGRSLDLNGQVRQTA
LKIVEVVLRQGLVHPITCVPYLIALETDPTEANAKLAHHLLMNMNEKYPTFFESRLGDGL
QMSFIFIQTISHGSDNANKKIQSKGSSNLKSRSDGCSLTQARLGVSRIYKLIRGNRVSRN
NFISSIVRKFDNPRLNDSMIPFLMYCAEILALLPFTFPDEPLYLIHAINRIIQVRGGSLQ
EEIKAFGIHLLQRNTPYIMYENGMIQPPQPGQFSDNIISSDMNGSVELDQSRPFCDFTSM
DLNQQIPPESVAHHELSNNNTTLEGKLHNISSMDACSISKDDLQKIQTMSLAAIALQLLL
KLKRHLKIVYSLNDARCQSFNPNEPSKPGEFLSKQNVPFDISETCTTLPTSYQEFMQRYQ
DFKNTLRDDAFDYSTYTANIKRKRPTVRKGRKPTMGGNDEDIDEDEDWSGGRRLSNSGRK
GSYSTRASRQR
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgccgccgtctgcttctgcttctgcctctgcctccggcaaccgcggaatcggc
ttgtctaatactatacactctgaggttgctccctgcttgcctttgccatcgcttccagtc
ttctttggcgcctccgagcctcagctccgactcttcgatgagccggatggaagctatgct
acttccacgactgatcttcttgctcagtctaagaagatcgctgatctgcttcgtgctact
gatgtgtcttacttaaatctcagagaagatgctaaggttcttcaagaagggtctgtggag
ccttttgaactctatgaggaagttcttcgccatgatgctgacgccttcaattatactgct
ccaggtcctattatggagcatgtctctagcagtacggtatctgataggaaagtttttgat
caaagactacatattagaagtcaagttgaaggagactctagaacaactcaaaatcataag
cctgaaactatgcctactaatgatacaccaatatcatcttctagaaaagtcaaagttaag
aagaaaggcagagatgaaacttcttctgttagaacagatccttctgagcttcaagacacc
acccttgcgaacttccgtgagttcttagaagacttttgtgcaagagctgaaattgtcggt
gatgatcgtgatgaatcagagtggctggctctgcctcttactgatctaagggtgcttgtc
aatgaaataatgtccatacgttcaaagaaacttcttcatttggttcctctcgataacctg
acgaggctgctgaaggttttagataatcagatacatagagcagaaggattgtctgttgaa
gaatgcgaacatttagattcagatgcagttgaaaccatcttttgtgctttggagtccata
catgcatctctgactataatggctcatgaccaaatgccaaagttgctttacaaagaagag
atcatcgagagaattctggagttctcccgacgtcacataatggatattatgtgtgcttat
gatccttcatatcgtgcattgcataaagccagtgaaaatggtgtgttcgaagtaaatgaa
gatgaagaacttgatggcgactatggttcatcgactaagaaacgtcgtgctgttaagact
actaaaatcaggaagcctgcatccaacaaggtatctactgctgttaatactattcttcag
aagatgtgcaccattgtcggtttacttaaggatttgttgttgatagagagattaccagat
agctgtattcttcaattagtgaagacaagcttttctacttttttggtggataatattcag
ctcttgcaacttaaggcaattggtttaatttgtgggatattttattcatatacacaacat
cgaaactatttgatagatgaattagttcagatgctcttcaaattaccatccacgaagcga
gctttaagagcttatcatctacctgaagaagaacaacgtcaaattcaaatgattactgcc
ctattgattcaattagtacattatagtgcaaacctccctgaagctttgaggcaagcatca
gatagtaattccatctttgaagtttcagttgacagtagttgccctaccaaatgccatgaa
gcagctacagaagcttgctgtcttttctggactcgtgtacttcagcgctttgctaatgtg
aagactcaagatgcatctgaagtgaaagtaatgatggaaaatatggttttggatctactc
acaacattgaatttacctgaatatcctgcatcagctcctattttggaggttctttgtgtg
ttattacttcagaatgccggactgaaatctaaagatatatctgctcgttcaatggccatt
gactttctcggcatgattgctgcaaggttgaaacgtgatgctgtcatatgtgccaccgac
aagtattggatattgcaagagttgggcgataaagaggatgatgctgatcagggttactct
aaagacgtctgttcaatatgcttggatggcagggtggaaaagtatatcctggtctgtcaa
ggttgtcagaggttatttcatgcggattgcatgggaggaagggaaaacgaagttcctaac
cggggctggaactgtcaaatttgtcactccagaaaacaacttctagtattacaatcatat
tgcaaatcccaatgtaagaatgatagtgaaaagcggaaagatcggtcagataaaggttcc
aaagtttcgtggcttgtttccaacattgaaattgttcagcagttgcttctgaattatctc
caggaagttggtcccgcagatgatcttcatctatttgttcgctggttctatctctgcctg
tggtacaaagatgatccaaaatctgagcagaaatttatttactatctctctagactgaaa
tctatggcaatagtgagggatggtggcaatacttcctctttattgactagggattcagtt
aaaaaaattactcttgcactaggacaaaataattctttctctagaggttttgataagatt
cttcacatgcttctggcaagtttaagggaaaattctccagtaattagggccaaggcttta
cgagcggtcagtataatagttgaagctgatccagaggtattgggagacaaacgtgtgcaa
ttggctgtggaaggaaggttttgtgattctgcaatatctgtcagggaagcagctttggaa
cttgttggcagacatattgcctcacatcctgatcttgggttcaagtattttgaaaagatc
gctgagagaatcaaagatactggagttagtgtgaggaaacgagccatcaaaatcattcga
gatatgtgcacgtcaaatgcaaatttctcagaatttacaagggcgtgcatagagatcatt
tcccgagttggtgatgatgaatcgagtattcaggatcttgtttgtaagacattctatgag
ttctggtttgaggagccttccagttcacaaactcagttctttggagatgatagctctgtt
ccattagagatagccaagaaaactgagcaaattgttgaagtattgaggaaaatgccaaat
catcaccttcttgtgactgttattaagagaaacttagcccttgattttttcccacaatca
actaaggctgttggtatcaaccctgtttccctcacgtcagttcggaagcgatgcgagttg
atgtgtaagtgcttactggaaaggatattgcaggtggaggaacgaagtaacatggacaca
gaagtgcgtgcacttccatatgtattggtcttgcatgccttttgtgttgtggatccaatg
ctctgtgcacctgcatccaacccatcccagtttgtggttactctccaaccttacctcaag
agccaggttgacaatcgagtggttgcccagttactcgagagtatcatattcataattgat
gcagtcttgcccttgctacgaaaattatctacaaatgttgctgaagatctagagcaagac
ttgaaacatatgattgttcggcactccttcttgacagttgtacatgcttgcatcaagtgc
ctttgctctttgagtaagatagcaggtaaaggtgcatgggttgttgagtatcttattcag
atgttttttaaacgcttggattctcaaggggttgataacaaacagctggtcggacgttca
ctcttctgtctcggattacttattcgctatggtagtcctttgttgagcaattccagcaac
aagaatgtcgacattgcaaagagcctcagcttgttgaagatgtacttgcagacggaagat
ttggttattagggttagagcactgcaggctttgggatttgttcttattgcaaggcctgaa
tttatgcttgaagaagatgttgggaaaattgtagaggaatcattgtcatctggttctgat
gttcgtcttaagatgcaagcattgcaaaatatgtatgattaccttcttgatgcggaaagt
caaatgggaatagatgaacctggtgatggagctggccccgataatggggagggtggccaa
agtgtacccgttgctgctggtgccggagacaccaacatatgtggtggtattgttcagttg
tattgggaaaggattctgggacgaagcttagatttaaatggccaagttcgtcaaactgcc
ctgaagattgtggaagtggtacttcgccaaggtcttgtccatccgattacttgtgttcca
tatcttatcgcacttgaaacagaccccactgaggcaaatgcaaagctggctcaccactta
ttgatgaatatgaatgagaagtacccaacattttttgaaagccggctgggggatggtctt
caaatgtcattcattttcatccaaactatcagccatggttctgacaatgcaaataaaaaa
attcaatcgaagggctctagcaatttgaaaagtagatccgatggttgttcgttgactcaa
gcaagacttggagtttctcgaatttacaagctcatacgaggaaaccgagtttcaaggaac
aattttatatcctccattgtgcgaaagttcgacaacccacggctgaatgactcaatgata
cctttccttatgtactgtgcagaaatacttgcattgttaccgtttacattccccgatgag
cccttgtacttgattcatgctattaatcgaataatacaagtaagaggtggatcacttcaa
gaagagatcaaagcgtttggtattcatttgttacaacggaatacgccgtatattatgtac
gaaaatggaatgattcagcctccacaacctgggcaattttctgataatataatttcatca
gatatgaatgggtcagtggagcttgatcaatctcgtccattttgtgattttacgtcgatg
gatctgaatcagcaaattccacctgagtcagttgcccatcatgaattgagtaataataat
acaacattggagggaaaactccataacatttcctcgatggatgcatgtagtatctcaaaa
gacgatcttcagaagattcagactatgagcctggcagctattgcactgcaacttcttctg
aaactaaagagacatctaaaaatcgtgtacagcctgaacgatgctcgatgccagtcattc
aatcccaatgaaccatcaaaacctggggagtttctgtcgaagcagaatgttcctttcgac
atcagcgaaacatgcacaactttgccaacatcttatcaagagtttatgcaaagataccag
gatttcaagaacactcttagggacgacgcatttgattactccacttacaccgcaaatatt
aaaagaaagcgtcctacagtaagaaaaggacggaagcctacaatgggtggcaacgacgag
gatattgacgaagacgaggattggagcggaggcaggaggttgagtaacagtgggaggaaa
ggtagctatagcaccagagcaagtaggcaacgatga
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integrated database retrieval system
