Benincasa hispida (wax gourd): 120072211
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Entry
120072211 CDS
T07258
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03082
ATP-dependent chromatin remodeling
bhj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120072211
03083 Polycomb repressive complex
120072211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhj03036
]
120072211
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120072211
Histone modification proteins
HAT complexes
HATB complex
120072211
HDAC complexes
Sin3A-HDAC complex
120072211
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120072211
PRC2.2
120072211
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
120072211
Heterochromatin formation proteins
Other heterochromatin formation proteins
120072211
Chromatin remodeling factors
NuRD complex
120072211
NuRF complex
120072211
NuRF complex (fruit fly)
120072211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
120072211
NCBI-ProteinID:
XP_038880551
LinkDB
All DBs
Position
2:complement(50798521..50805263)
Genome browser
AA seq
516 aa
AA seq
DB search
MDSSQSQQQQQQQQQQPQQQPPPPPQQPVVKKKETRGRKPKPKDEKKDEQQTKKMKAQQQ
PSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSV
PNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVA
THTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKD
KLVVLWSIQDHITTSATDPAASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHEDT
VEDVTFCPSNAQEFCSVGDDSCLILWDARTGSGPAVKVEKAHNADLHCVDWNPHDDNLII
TGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIW
DYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGGGG
TLQIWRMSDLIYRPEEEVLAELEKFKSHVIECAAKP
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggactcttctcagtcccagcagcagcagcagcaacaacaacaacagcctcaacagcag
ccgccgccaccgccgcagcaacctgttgtgaagaagaaggagactagaggccgaaagcca
aagcctaaggacgagaagaaggacgaacaacaaactaagaagatgaaggctcaacaacaa
ccctccgtcgacgagcgttatactcagtggaagtctcttgttcctgttctctatgactgg
tttgctaaccataatctcgtttggccttctctctcttgccggtggggtcctcagcttgag
caagcgacgtataagaatcgacagcgactttatctttccgaacagactgatggtagtgtt
ccaaatacactggttattgcaaattgtgaagttgtgaagcctagggttgcagctgcagag
cacatttctcagttcaatgaagaagcacgctcaccatttgtgaagaagtacaagactatc
atacatcctggtgaggttaacagaattagggaacttccccagaattcccgaattgttgcc
acacacactgatagtccagatgttctcatttgggatgttgaggcacaacctaaccgtcat
gctgtccttggtgccacaaattctcgcccagatttgatcctgactggtcatcaagaaaat
gccgagtttgctctagcaatgtgccccactgaaccttatgttctttctggagggaaggac
aaattagttgttttgtggagtatccaggaccacataacaacttctgccacagaccctgct
gcttcaaaatcaccaggatctggaggatctatcataaagaagccgggagaggcaaatgat
aaggcttctgatggcccttctattgggccacgaggagtttaccatggccatgaggatacc
gttgaagatgtgaccttctgtccgtccaacgcacaggagttttgcagtgtgggagacgat
tcttgcctaatattatgggatgcccgtactggctcgggcccagctgtcaaggtcgaaaag
gcacataatgctgatcttcattgtgttgattggaatccccatgatgataatcttataata
acagggtcagcagataattctattcgtttgtttgatcgtcggaatctcacttctaatgga
gttggctcgcccatctacaaatttgagggccacaaagcagcggttctttgtgttcagtgg
tctccagataaatcatctgtctttggaagttcggcagaggatgggctgttgaatatttgg
gattacgataaggttggtaaaaagacagagcgagctacaaggacgcctgctgctcctccc
ggtttattttttcagcatgctgggcacagggataaagtcgtcgactttcattggaatgca
gctgatccatggactgttgtgagcgtgtctgatgattgtgatacgactggtggaggaggg
acgttgcagatttggcgcatgagtgacctaatttatcgaccggaagaggaggtgttagct
gagcttgaaaagttcaaatctcatgtaattgaatgtgctgcaaagccttga
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