Benincasa hispida (wax gourd): 120072260
Help
Entry
120072260 CDS
T07258
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120072260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120072260
03036 Chromosome and associated proteins [BR:
bhj03036
]
120072260
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120072260
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120072260
PBAF complex
120072260
GBAF(ncBAF) complex
120072260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
DUF7573
Motif
Other DBs
NCBI-GeneID:
120072260
NCBI-ProteinID:
XP_038880615
LinkDB
All DBs
Position
2:12765669..12768886
Genome browser
AA seq
559 aa
AA seq
DB search
METSQRETSYRRVPDEPELDLYTIPSQSSWFSWDEIHETEKLALKEFFDGSSISRTPRIY
KEYRDFIINRYREEPSSRLTFTEVRKSLVGDVNLLHKVFIFLETWGLINFGATSDDNDLA
EVEDGESSVIKIEEGVPNGIRVGAMPNSVKPISAPPIVEDSAIVNGSGFKLPPLTSYSDV
FSELLKQKILVCGNCGQHCGSRYHQCAKDGYLVCENCFKDGNYGEQRLLEDFELKTNEFI
EDSGNIGAVWTEAETLLLLESVLKHGDDWDLVAQNVQTKTKVDCILKLVELPFGDSLLCS
DAPRSEVSDPNNNVASEKEITDPPPNNQEIAGSEDQCTKNINEDEDEENQGPPKRQCTGS
VPDTSSSLMKQVALISSMVGPHIMAAAATASVTALCDENLYPKEIFDDQEFFVPNGSCSA
ASTTSNHEDERILNNEDSVAKERPQSGDIMAQDKDDIPLILRVRTAIATALGAAAAHAKL
LADQEEREIEYLLAIMIETQIKKMQCKVKHFEDLELIMETECPVFEELEDKLLMERVSVL
QSAFDLGISRWKDYPSVRS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctcacagcgggagacgagttacagacgagttccagacgaaccagagctcgat
ctatacaccattccaagtcaatccagttggttttcgtgggatgaaatccacgaaacggag
aaattagctttgaaggagttttttgatggaagctcgatatcaagaactccgcgtatatat
aaagaatatagagattttattatcaataggtacagggaagagccttccagcaggcttaca
ttcaccgaagttcggaagtctctggtgggagatgttaatttgcttcataaggtgtttatt
ttcttggagacatgggggctgatcaactttggcgcaacttcggatgacaatgatttggcg
gaggtagaagatggagagagttctgtaattaagattgaagagggggttcccaatgggatt
cgtgtcggagcaatgccaaattcggtcaagccaatttcagcacctcctattgtggaagac
agtgctatcgtcaatgggagcgggtttaaattgccccctttgacttcttattcagatgtt
ttcagcgaattgttgaaacagaaaatcttagtgtgtgggaactgtggccagcattgtgga
tctagataccatcaatgcgccaaggatggttatttagtctgtgaaaattgtttcaaggat
ggaaattacggagagcagaggctcttggaagattttgagttgaaaaccaacgagttcatt
gaagatagtggtaatatcggagctgtgtggactgaggccgaaactcttcttcttttggaa
tccgttttgaagcatggagatgattgggatctcgttgctcaaaatgttcaaaccaagact
aaagtggattgtatattgaagctcgtggagttgccgtttggggactccttgttatgctct
gatgctccaaggagtgaggttagtgatcctaataacaatgttgctagcgaaaaagaaatt
acagaccctccacctaacaatcaggagattgccggaagtgaagaccaatgtaccaagaac
ataaacgaggacgaagatgaggagaaccaaggtcctcccaagcgacagtgcaccggttct
gttccagatacgagcagttctctgatgaaacaggtagctttgatatcgagcatggttgga
ccacatattatggcggcagctgctactgcttctgttacagcactctgtgacgaaaactta
tatccgaaagaaatctttgatgatcaagaattttttgtacctaatggatcgtgttctgcg
gcttccaccacatcaaatcatgaggatgagagaattctcaataatgaagattcagtggcg
aaggaaaggcctcaatcaggtgatataatggcccaggacaaagatgacatacctttaatc
ttacgagttagaactgcgattgcaacagcacttggtgctgccgcagcacatgcaaaatta
cttgctgatcaggaagagagagaaattgaatatttattggcgataatgatagaaacacag
ataaagaagatgcaatgcaaagttaagcattttgaagatctcgagctgattatggaaaca
gaatgtcctgtttttgaggaactagaagataaactgttaatggagcgggttagtgtcttg
caatctgcatttgatcttggtatatctaggtggaaggattatccttctgtgagatcttga
DBGET
integrated database retrieval system
