Benincasa hispida (wax gourd): 120072644
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Entry
120072644 CDS
T07258
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120072644
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120072644
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
120072644
NCBI-ProteinID:
XP_038880992
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Position
3:complement(32704674..32708813)
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AA seq
476 aa
AA seq
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MLATTYIVLLALLLPTSLPLRASAGAAAVALNLTLPGQHPSPELVAQEVHRKVNASLTRR
QLLQISEKDESSSCYTGNPIDDCWKCDPNWPNNRQRLADCAIGFGQYALGGKNGEFYIVT
DDSDDDAVNPKPGTLRYAVIQPQPLWIVFPANMLIKLKQELIFNSYKTLDGRGANVHIVG
GGCITLQYISNVIIHNIHIHHCYPSGNTMVRSSPTHYGYRTKSDGDGISIFGSKDIWIDH
CSLSRCKDGLIDAVMGSTGITISNNYFSHHDEVMLLGHSDHYLPDSGMQVTIAFNHFGEK
LVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVET
SESEWRGWNWRSEGDILVNGAFFVTSGQGLEVKYEKAYSVEPKSAALIDQLTWHAGPLGV
GGRDNNLGMWTTGPNGGGFALGSGMDYTDDMSESYFVRAFSLLLACFCALVVAFML
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttggccacaacctacattgtgctgctagctttgctgctacccaccagcttgccgctc
cgtgccagtgctggtgccgccgctgttgctctcaacctcactctccccggtcagcatccg
agccctgaactggttgcccaagaagttcacaggaaagtgaatgcttccttaacgaggagg
cagttgctccaaatctcagagaaagatgaatcttcttcttgctacaccgggaaccccatc
gacgactgctggaaatgcgatccaaattggccaaacaaccgccaacgcctcgccgattgc
gccataggattcggccagtacgctctcggcggcaaaaacggcgagttctacatcgtgaca
gacgattccgacgacgatgcggtaaatccaaagcccggaacattacgatacgcagtgata
cagccgcaaccactctggattgtcttccccgccaacatgctcatcaaactcaaacaggaa
ctcatcttcaacagctacaaaaccttagatggccgcggcgccaatgtccacatcgtcggc
ggtggctgcattacgttgcagtacataagcaatgtcattatccacaacatccatatccac
cattgttatccatcaggtaacacaatggtccgatcaagtccgacccattatggataccgg
acgaaatcggacggcgacgggatatcgatcttcggatcgaaggacatatggattgatcat
tgttcattgtcgcgttgcaaagatgggctaatcgatgcggtgatgggatccaccggaatc
acgatttcaaacaattatttctcacatcacgatgaagttatgctgttgggtcacagcgat
cactacttgccggattccggaatgcaggttacgatagcattcaaccactttggggagaag
ctagtgcaaaggatgccgcgatgccgattaggttacattcacgtcgtcaacaatgacttc
acccaatgggaaatgtacgcaatcggcggcagcggaaaccccaccatcaacagccaaggc
aaccgctacaccgccccctacgaccgcaacgccaaggaggtcactaagcgagtcgaaact
tccgagtccgagtggcgtggctggaactggcggtccgagggcgacattctcgtcaacggc
gcctttttcgtcacttccggccaaggccttgaagtcaagtacgagaaagcctacagcgtc
gagcccaagtccgccgccctaattgaccagctcacttggcacgccggcccgctcggcgtc
ggtggccgggataataatttgggaatgtggactactggccctaacggtggaggctttgcg
cttgggtctggtatggactatactgacgacatgtcggaaagttattttgttagggctttt
tctcttttgttggcctgtttttgcgcattggtggttgcttttatgctatga
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