Benincasa hispida (wax gourd): 120072790
Help
Entry
120072790 CDS
T07258
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120072790
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120072790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Dioxygenase_C
Motif
Other DBs
NCBI-GeneID:
120072790
NCBI-ProteinID:
XP_038881216
LinkDB
All DBs
Position
3:complement(11514435..11519513)
Genome browser
AA seq
661 aa
AA seq
DB search
MGKKKLSVQNQGSHVSLERYDSYFLVIEFSVIHVCCDDLQVVLDNGLLKVTISNPQGYVS
GIMYGGLDNLLDVKSSESKRGYWDINWSWPGGKDRYQLLKGSEFNVINTSDDTIEISFRK
VLDPSTRGNKLPLGVDIRYIMRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFH
YMAISDEKQRIMPMPEDLHPGRGEQLIVPESVLLVNPINPDLKGEVDDKYQYSMDNKDGG
VHGWISSSPNNIGFWIVFPSHEFRNGGPTKQNLTVHTGPTCLAMFHGTHYIGEDILTHIK
EGQTWRKVFGPILVYLNSTSDVSEAHNLWIDAKEQRMLEETAWPYNFVSSSFYLMANERG
SISGRLLVQDRFISSSPIPARDAHIGLSAARKEGAWQTESKEYQFWVKTDSNGDFTIRNI
IPGVYGLHGWVPGFIGDYLHKSLVTVSAGSYTHLGILTYSPLRDGPTLWEIGFPDRTANS
FYVPDVNPMYVNKLFLHSPEKFRQYGLWEGYSDLHPINDQVFTVGINNPKKDWFFAQVCR
RGEDGEYVATTWTIKFNMTSLTNETYRLRLAIASATRSNLKINVNSKGSEQSLVFQLMDL
GMDNTVCRHGIHGLYRIYSIDIPSSMLVKGDNSIFLTQARNGDALCGILYDYLRLEAPDT
P
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagaagctgagcgtgcaaaatcaaggctcccatgttagtttggagcgctat
gactcttatttccttgtgatcgagttttctgtaatccatgtgtgttgtgatgatttgcag
gttgtattggacaatggattgttgaaggtgacaatatcaaacccccaagggtatgtaagt
ggcatcatgtatggaggcctggacaatctgttagatgtgaaatcaagtgaatctaaaaga
ggatattgggatatcaactggagttggcctggaggcaaggacagataccaattgcttaag
ggatctgaattcaatgtcatcaacacaagtgatgacacgatcgaaatatcattcaggaaa
gttcttgacccatcaactcgaggcaacaaacttccacttggtgtggacataaggtacata
atgaggactggtattccaggcttctattgctatgcaatctacgagcacccgtcagaatgt
cgggctttcgatcttgctcagacaagaatggtgttcaaactgcgacaagagaagttccac
tacatggcaatttcagatgagaagcaaagaataatgccaatgccagaggatttgcatcca
ggcagaggtgaacaactaattgtaccagagtcagttctgcttgtaaatcccattaatcct
gatctgaaaggagaggtagatgataagtaccaatactccatggataacaaagatggagga
gttcatggatggataagttccagcccaaacaacataggtttttggatagtttttccaagc
catgagttccgaaatggaggtcctacaaagcaaaatctgacagtccatactggtcctaca
tgtcttgctatgtttcatggaacccattacattggagaagatatactcacacatattaag
gagggacagacatggagaaaggtctttggtcctattcttgtataccttaactccacctca
gacgtatcagaggcacacaatttatggatagatgcaaaagaacagagaatgctagaggaa
acagcatggccgtacaattttgtctcttcatctttttatttaatggcaaatgaacgtggt
tcaatttcaggaagactactagtccaagacagatttatttcaagttcccccatccctgcg
agagatgcgcatattggtttatccgctgctagaaaagaaggtgcctggcaaacagaaagc
aaggaatatcagttttgggtaaaaacagattccaatggagatttcactatcagaaacatt
attcctggagtctatggacttcatggttgggtacctgggttcattggtgattatcttcac
aagtcactagtaacagtatctgcaggatcttatacccatcttggcattctgacctatagt
cccctcagagatggtcctactttatgggagattggttttccagaccgtacagctaatagc
ttctatgttcctgatgtgaatccgatgtatgtcaacaagttattccttcacagcccagaa
aagttcaggcaatatggtttatgggagggatacagtgatttacatccaataaatgaccaa
gttttcactgtgggtatcaataatccgaaaaaagactggttctttgctcaagtttgtaga
agaggggaagatggtgaatatgttgcgacaacatggactattaagttcaacatgacatcc
ttaaccaatgaaacttaccggctgaggttggccattgcatctgcaacacgctcgaacttg
aagattaatgtcaactcaaaggggtcggagcagtctctggtcttccagctgatggatttg
ggaatggataacacagtttgtcgacatgggattcatggactgtaccgaatttacagtatc
gacattccatcttcaatgcttgttaagggagataactccatatttctcacacaggcaagg
aatggagatgcactctgtggaattttatacgattatttaagattggaagctcccgatact
ccatga
DBGET
integrated database retrieval system
