Benincasa hispida (wax gourd): 120072845
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Entry
120072845 CDS
T07258
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120072845
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120072845
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120072845
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
120072845
NCBI-ProteinID:
XP_038881293
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Position
3:complement(15872412..15880760)
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AA seq
614 aa
AA seq
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MKIVTYNVNGLRPRIAQFGSLLKLLDSFDADIICIQETKLRRQELRADLIIADGYESFVS
CTRTSEKGRTGYSGVATFCRVKSAFSSNEVALPVRAEEGFTGLLESSQDGKGTMAVVAEG
IEEFSKEELLKLDSEGRCIVTDHGHFVLFNIYGPRAESDDSERVLFKLKFFNVLQKRWEH
LLHLGKRIFVVGDLNIAPTSMDRCDAGPDFENNEFRRWLRSLLVAYGGHFIDIFRAKHPD
RRDAYTCWPQSTGAEVFNYGTRIDHILCAGPCLHHDSNLPGHNIVACHIMECDILSQYKR
WKDGNSFRWKGERTVKLEGSDHAPVYASLLEIPDTPQHSTPSLSARYNPKIHGLQQTLVS
MLLKRQAAEDSAPCKISNSFSRGNIILGNCSQGLNGSFDNRDQSGFLPNESCSSTNLEAE
DSLLKTEDCSGGSYAEEAACNTLITHEFLHTKALPENETRKRVRRCSQMSLKSFFQKNSV
VSNNNDSSNADSSINKADTSESNPIEIPRSNTQISDSGQHLEPCEGQSQINASSVEKEKS
DVALLEWRRIQQVMQNSIPLCKGHKETCVARVVKKQGPNNGRRFYVCARAEGPASNPEAN
CGYFKWAASKSRHK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagttacttacaacgtgaatggtcttaggccacgcatcgcacagtttggttca
cttcttaaactgctcgattccttcgatgccgatatcatttgcattcaggaaacgaaacta
agaaggcaggaattgagagcggatttaatcattgctgatggttacgaatcatttgtttct
tgcactcgtacctctgagaaaggtcgaacaggctactcaggggttgctacgttttgccgt
gttaagtcagcattttcgagtaatgaagtagcattgccagttcgggcggaggaaggcttc
acaggtcttctagaaagctcgcaggatggaaaaggcacgatggctgtagttgcagaaggg
attgaggaattttcgaaagaggagctccttaaattagacagtgaagggcgctgtattgtc
acagatcatggtcattttgttctcttcaacatttatgggcctcgagctgaaagtgatgat
tcagaaagggttctattcaagttaaaatttttcaatgtgctacagaaaagatgggagcat
cttctgcatctaggaaaaaggatatttgtcgttggtgatcttaacattgcacctacttca
atggatcgctgtgatgcaggaccagattttgagaataatgagtttcggagatggctgaga
tctttactggtggcatatggtggccatttcattgacattttcagagcaaaacatcctgat
cgaagagatgcatatacatgctggcctcaaagtacaggtgccgaggtattcaattatggg
acgaggatcgaccatatattgtgtgcaggaccatgcctacatcatgacagcaacctgcca
ggccataatattgtagcttgtcatattatggaatgtgacatactgtcacagtacaaacgc
tggaaagatggaaattcttttaggtggaagggagagcggactgttaaactagaaggttct
gatcatgcaccggtttatgcaagtctactggaaatccctgatactcctcaacatagtact
ccatctttatctgcaagatacaatcccaagattcacgggcttcagcaaactcttgtgtcg
atgcttctgaaaagacaagctgctgaagattcagcaccgtgcaaaatatcaaattcattt
tcacgtgggaacatcatcttagggaattgttctcagggacttaatggatcatttgataat
cgtgaccaatcaggctttcttcctaatgaatcttgctcatcgacaaacctagaagcagaa
gattctctattaaaaacagaagactgttctggtggaagttatgccgaggaggctgcatgc
aacaccttaattacgcatgagtttctacatacgaaagcattacctgagaatgaaactagg
aaaagagttagaaggtgttcccagatgtcattaaagtcgttcttccagaaaaattcagtt
gttagcaacaataatgacagctctaatgcagattcttcaattaacaaagcagatacctcc
gaatctaatcctattgaaattcctagatcaaatactcaaattagtgattcaggccaacat
ttagaaccatgtgagggtcagtctcagattaatgcctcttctgtagagaaagaaaagagt
gatgttgccttgttggagtggcggaggatacagcaggttatgcagaatagcatacctctt
tgcaagggccataaggagacttgtgttgctcgagtagttaagaaacaaggtcctaataat
gggcgcagattttatgtttgtgctcgtgcggagggtcccgcatctaatcctgaagcaaat
tgtggttactttaaatgggcggcttccaaatctcggcataaatga
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