Benincasa hispida (wax gourd): 120073081
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Entry
120073081 CDS
T07258
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120073081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120073081
03009 Ribosome biogenesis [BR:
bhj03009
]
120073081
04131 Membrane trafficking [BR:
bhj04131
]
120073081
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120073081
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120073081
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120073081
Membrane trafficking [BR:
bhj04131
]
SNARE
SNARE associated proteins
Others
120073081
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120073081
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120073081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
AAA_17
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
Viral_helicase1
IstB_IS21
ABC_tran
NACHT
AAA_7
Vps4_C
AAA_24
NB-ARC
TsaE
AAA_lid_PRS2_C
DUF815
Zeta_toxin
Sigma54_activat
ResIII
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
120073081
NCBI-ProteinID:
XP_038881619
LinkDB
All DBs
Position
3:33205175..33211067
Genome browser
AA seq
807 aa
AA seq
DB search
MANQAETSDAKGPKRDFSTAILERKKAANRLIVDEAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCDGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRANSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMEEDVEDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSD
NPSSGTAAADPFASSAGGGADDDDLYN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcaagctgaaacctccgacgctaagggtccgaagagggattttagtaccgcg
attctagagcgcaagaaagctgccaaccggcttattgtcgatgaggccatcaatgatgac
aactctgtcgttgcgcttcaccctgacactatggagaagcttcaacttttccgtggcgac
acgatcttgatcaaggggaagaaaaggaaggatacgatctgcattgctcttgctgatgac
acatgtgatgagccaaaaataagaatgaacaaggttgtaagaagcaaccttcgtgtcaga
cttggagatgttgtttccgtgcatcaatgtgctgatgttaaatatggcaagcgagtacac
attcttccagtagatgacactattgaaggtgtcaccgggaatctttttgatgcatacttg
aaaccgtactttttggaagcctatcgcccagtaaggaagggtgatctcttccttgtgagg
ggaggaatgagaagtgtggagttcaaggtcattgaaactgatcctcctgaatattgtgtg
gttgcccctgatactgaaatcttctgtgatggggagcctgtgaaaagagaggatgaagat
agattagatgaagttggttatgatgacgttggtggtgttagaaaacaaatggcacaaatt
cgtgaattggtggaacttcctctgagacatccacaactttttaaatccattggagtaaaa
ccaccgaagggaattctgctttatggaccccctggatctggaaagactttgatcgccaga
gctgtagctaatgaaactggggctttctttttctgtatcaatgggccagaaattatgtca
aagttagctggagagagtgaaagcaacctcaggaaagcttttgaggaggcagaaaagaat
gcaccatctattatctttattgacgagattgattcaattgctcctaagcgagagaaaact
catggggaagttgagagaaggattgtttctcagctcttgacactaatggatgggttaaaa
tctcgtgcccatgtcattgtcattggagctacaaatcgtgcaaacagcatcgatccagct
ttgagacgatttggaagatttgacagggaaatagatattggagttcctgatgaagttggg
cgtcttgaggttcttcgtatccatactaagaacatgaagcttgctgaagatgttgactta
gaaagaattgccaaggatacacatgggtatgttggagctgacttggcagctctttgtact
gaggctgcacttcaatgcattagagagaaaatggatgtcattgatttggaagatgaaaca
atcgatgctgagattcttaactcaatggcagtcacaaatgagcacttccaaactgccctt
ggaactagtaatccatctgctctacgtgaaaccgttgttgaagtgcctaatgtcagttgg
gaagacattggaggtcttgagaatgtcaagagggaacttcaagagactgtacaatatcca
gtggaacatcctgagaagttcgagaagtttggaatgtcaccctctaagggagttcttttc
tatggccctcctggatgtggaaaaactcttctggccaaagctattgcaaatgagtgccag
gcgaacttcatcagtgtcaagggtcctgaattgcttacaatgtggtttggagaaagtgag
gccaatgttcgtgaaatttttgataaggcccgtcagtctgcaccttgtgttctgttcttt
gatgagcttgactctattgccactcagagaggcagcagcgtgggagatgctggaggtgct
gctgatcgagttttgaaccaacttttgactgaaatggacggaatgtcagcaaagaaaact
gtcttcataattggggcaaccaacagaccagatattatagatcctgcacttcttcgtcca
ggacgtctagatcaattgatttatattcctcttcctgacgaggattctcgtcaccaaatt
ttcaaggcttgcttgaggaagtctccggtatcgaaagatgtagaccttagagcccttgct
aaatacactcaaggttttagtggtgctgatattacagaaatctgccagcgtgcttgcaaa
tatgctatcagagagaacattgagaaagatattgagagggagaggaggagaagagataat
cctgaggctatggaagaggatgtagaggatgaggtagcggagattaaagctgctcatttt
gaggagtcaatgaagtttgctcgcagaagtgtgagcgatgccgatattcgtaaataccag
gcatttgctcaaacgctgcagcagtcaagagggtttggttctgaattcaggttctcagat
aacccttcttctggaactgcagcggccgacccgtttgcatcttctgctggtggtggggct
gatgatgacgatctttacaactag
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