Benincasa hispida (wax gourd): 120073371
Help
Entry
120073371 CDS
T07258
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bhj01009
]
120073371
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120073371
Protein phosphatases and associated proteins [BR:
bhj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120073371
Membrane trafficking [BR:
bhj04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
120073371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
NDC80_loop
Motif
Other DBs
NCBI-GeneID:
120073371
NCBI-ProteinID:
XP_038882115
LinkDB
All DBs
Position
3:complement(5504789..5534378)
Genome browser
AA seq
1027 aa
AA seq
DB search
MESQPSQSGRSPTDYSTLVSRQTSLGRTTSSSSAKSNSDASSQSLSSILNNPHAGKSDAS
WVGWWSSSSTISPPEFMPLASTIATSEVTRFDFNNYTALISDSFNRFEDIRNHSSKENGG
LDSIGGQGEALVACLREVPALYFKEDFALEDGATFRAACPFLNVSQNLVLQEKLSHYLDV
VELHLVKEISLRSNSFFEAQGQLQDLNVKIVEGCSRIRQLKETIRLLDADLVDSAREIQE
QNATRNNLLALQQKLKLILYVNQAISALKLLVASADCAGALDVTDDLLHLLEGDELAGLH
CFRHLRDHVAASIESITSILSAEFMRASIHDAGDVDIGIITETKAWASNLMNGKDEVKLD
EEETSNFRDRLLPIIIGLLRTAKLPSVLRLYRDAVTADMKTAIKNAVAELLPVLLIRPLD
SDFAPGERTMDADGGGVSLASKLRGLSSEGFVQLLSAIFKIVQVHLVRAAEVKKSIEWIM
CNLDGHYAADSVAAAIATGAAAAGTAQDTDNQGGLLLPHLPQRVAAKVTSLQGKANDAAN
PSNMSRNFRADVLRENTEAVFAACDAAHGRWAKLLGVRILVHPKLRLQEFLSIYNITQDF
ITATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMTKIKAVLDQETWVEVDVPDEFQSIA
ESLCSQELLSEKVDLAQGNMDQSYSDVATNNDASRIVGGGSLNAQHYSEQIDSSDMSGGN
TEHVKPTPADTIEKSRADVTIPTMQINNINVKERGKSSSQTLLHKGVGYHMVNCGLILLK
MLSEYIDMNDSLPALSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALA
SQVISFTFAIIPEIRRILFFKVPEVRKTLLLSEIDRVAQDFKVHRDEIHTKLVQIMRERL
LVHLRGLPQIVESWNRLEDSDPQPSQFARSLTKEVGYLQRVLSRTLHEADVKAIFREVVK
IFHLQISEAFSRLDISTPQAKDRLLRDVKHILGCIRSLPCDDLSKPDIPNWGQLDEFLDQ
RFGSEAG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccagccttcccaatcgggaaggtccccgactgactattccaccctcgttagt
agacaaacgagtcttggtcgaactacttcctcctcctccgctaaatccaactccgatgcc
agcagccagagcttgtcttcgattctcaacaacccgcacgctggaaaatccgatgcgtcc
tgggttggctggtggtcgtcttcgtccaccatcagcccacctgagttcatgcccctggct
tccaccatagccacatccgaagttactcgattcgattttaacaactacacggccctgatc
tcggattcttttaatcgattcgaggacatacggaaccattccagcaaggagaacggtggc
ttggatagcattggtggccagggagaggcccttgtggcttgtttgagagaggttcccgcg
ctttacttcaaagaagatttcgcattggaggacggggcgacattccgtgcagcgtgcccc
ttcttgaacgtatcgcagaatttggtgctgcaagagaagctttcgcattatttagatgtg
gtggaattgcatttagtcaaggaaatttcactgcgttccaattctttcttcgaggctcag
gggcagctacaagacttaaatgtcaagatagtggaggggtgtagccggatacggcaatta
aaggagaccatacggctcttggatgctgatttggtggattctgccagggaaattcaggag
cagaatgcgaccaggaacaatttgttggctcttcagcagaaattgaagcttattttatat
gttaatcaggccatttccgctcttaaattgctagtagcatcagcagattgtgctggagct
ttggatgtgactgatgatttactacatcttctggagggtgatgaacttgctggtctacat
tgctttcgccacttacgtgatcatgtagcagcatcaattgaatccataaccagcattctt
tcagcagaatttatgcgtgcctcaattcatgatgctggagatgtagatatcggaattata
actgaaacaaaagcgtgggcttcaaatttaatgaatggaaaggatgaagtcaagttggac
gaggaagaaacctccaacttccgcgatcgtcttcttcctattattattggattgctcagg
actgccaagcttccttctgtcttgaggttatatcgtgatgcagttacggctgatatgaaa
actgctattaagaatgcagtggcagaattacttcctgttcttctaatcaggcctcttgac
tcagattttgcacctggggagagaacgatggatgcagatggtggaggtgtgtcacttgca
agcaagctgaggggcctgtcatctgaaggctttgttcaacttttaagtgccattttcaag
attgtacaggtacatttggtgcgcgctgcagaagtgaaaaagtctatcgaatggattatg
tgcaaccttgatgggcattatgcagcagattcagttgctgctgcaattgctactggtgct
gcagctgctggtacagctcaggatactgataatcaaggtggtttgcttcttccacattta
cctcagcgagtagctgcaaaggttacttccttacaaggaaaagcaaacgatgcagcaaat
ccttcaaatatgtctagaaatttcagagctgatgtactgcgagaaaatacggaagctgtt
tttgcagcttgtgatgctgctcatggaagatgggctaaactccttggtgttcgtattctt
gttcatccaaagttgagattgcaagagtttttaagcatatacaacattacacaagatttt
attactgccactgaaaagattggtggaaggttgggatatagcattcgtggaactttacag
tcccaggccaaagcttttgttgattttcagcatgaatctcgtatgacaaaaataaaagca
gtgcttgatcaggaaacatgggttgaagtggatgttcccgatgaatttcaatccatagct
gaatcactttgttcgcaagagctgctttctgaaaaagtcgatcttgctcagggtaatatg
gaccaaagctacagtgatgtggctactaataatgatgcttcacgcattgtaggtggtgga
tcactcaatgctcaacattactctgagcaaatcgattcaagtgacatgtctggcggcaat
actgaacatgtgaaacctactcctgccgatacaattgaaaagagtagagctgatgtcact
attcctactatgcaaattaacaatattaatgtgaaagaacgtggaaaatcaagttctcag
actttgctacacaaaggcgttggttatcacatggtaaactgtggtttgatcttgctcaag
atgttgtcggagtacattgacatgaacgattctcttccagcactatcttcggaagttgta
catcgtgttgtggaaattctcaagtttttcaatacaaggacttgtcaacttgtacttgga
gctggtgctatgcaggtgtctggtttgaagtctatcacatccaaacacttggccctggcc
agtcaagttatcagttttaccttcgccattattcctgaaattaggagaatcctttttttc
aaagtacctgaagtgcgaaagacactgttgctctcagagattgatcgagtggctcaagac
ttcaaagttcaccgagatgaaattcatactaagctggtccagataatgagggaaaggtta
ttagtgcatcttcgtggcctgcctcaaattgttgaaagttggaataggctcgaagattct
gacccacagcccagtcagtttgctcgatcacttaccaaggaagttgggtacctgcagcgt
gtcttatctcgaaccttacatgaggctgatgttaaggcaatatttagggaagtggtcaaa
atcttccatttacaaatctctgaagcattttctcgattagacataagcaccccacaagca
aaggataggctgcttcgtgatgttaagcacattcttggctgcataagatctttgccttgt
gacgatttgagtaaacctgacatcccaaactgggggcaacttgatgaattcttggatcaa
agattcggatctgaagctggataa
DBGET
integrated database retrieval system
