Benincasa hispida (wax gourd): 120073448
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Entry
120073448 CDS
T07258
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120073448
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120073448
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120073448
NCBI-ProteinID:
XP_038882226
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Position
3:complement(11746897..11748807)
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AA seq
380 aa
AA seq
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MALAFPLLCLLIFLPTIFSTANPNNYYNKPPLNLIDACWRSNPNWAANRRALADCAVGFG
SDAIGGKFGSIYVVTDPSDDPEYPEPGTLRFGVIQPQPLWIVFARDMVITLKRELMVNSF
KTIDGRGAKVEISNGPCITIQNVSHVIIHGISIHDCKPAKPGRVRSTVTHCGDRQQSDGD
AISIFSSSHIWIDHCSLARCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFTDDR
IMRVTVAFNRFGAGLVQRMPRVRFGYAHVANNWYNKWEMYAMGGSADPTIFSQGNYFMAP
DDPFSKQVTKREVYAGGWKNWKWRSSNDVFMNGAYFIQTGWGSCTPFYTRAQAFPVAHGS
FAPLLTQTAGTLTCVLGKPC
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggctttggctttcccattactgtgcctcttaattttcctacccacaattttctccacg
gccaaccccaacaactactataacaaaccacctctcaacctcattgacgcatgctggcgg
agcaaccccaattgggcagccaaccgccgcgcccttgccgactgcgccgtggggttcggc
agcgacgccataggaggcaaattcgggtcaatctacgtcgtcacagacccatcggacgac
ccagaatatccagaacccggaacgctgcgttttggagtgatccaaccgcagccattatgg
attgtattcgcaagagatatggtgattacacttaaaagagaattgatggttaacagcttt
aagaccatagacgggcgaggggcaaaagtggaaattagcaatggcccatgtattaccatc
caaaacgtgagccacgtcataatccacggcattagcatccatgactgtaagccggccaag
cctgggcgcgtgaggagcaccgtcactcactgtggggaccgccaacaatcggacggtgat
gctatttctatattcagttcttctcatatctggatcgaccattgctctttggctcgatgc
actgatggacttattgacgtcatccatgcgtccactgccgtcaccatctctaacaactac
ttctctcaacatgataaagtgatccttcttggtcacaacgatgaatttacagatgataga
atcatgagagtgacggtagctttcaatcgttttggagctgggcttgttcaaagaatgccc
agggtgagatttgggtatgcccatgttgcgaataattggtacaacaagtgggaaatgtac
gcaatgggtggcagtgcagatccaaccatcttcagccaaggaaactacttcatggctcct
gatgatcctttctcaaagcaggttacaaagagagaggtttatgcgggtggatggaagaat
tggaaatggaggtcttcaaatgatgtgtttatgaatggggcttatttcatccaaactggg
tggggatcttgtacgcctttctacactcgagctcaagcatttcctgttgctcatggctct
ttcgctcctcttttgactcaaaccgctggcactttgacttgtgttcttggcaaaccttgt
tga
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